RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ZACNQ401N2 412 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 C15orf39Q6ZRI6 1047 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TUBGCP2Q9BSJ2 902 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TUBGCP4Q9UGJ1 667 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 ANO9A1A5B4 782 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 FGF18O76093 207 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 DDHD2O94830 711 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 C4BPAP04003 597 aaKnown RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 ASGR2P07307 311 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TPM2P07951 284 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 LAG3P18627 525 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 MXI1P50539 228 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 SOX4Q06945 474 aaPredicted RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 PPP3CAQ08209 521 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 KRT31Q15323 416 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 UPP1Q16831 310 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TCERG1LQ5VWI1 586 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 PLPP4Q5VZY2 271 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 KRT39Q6A163 491 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 SV2AQ7L0J3 742 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 LRRC52Q8N7C0 313 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 OR5B17Q8NGF7 314 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 FAM193BQ96PV7 902 aaPredicted RBP13.07□□□□□ -0.32
CCDC84-209ENST00000580556 CWH43Q9H720 699 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 NRDE2Q9H7Z3 1164 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 DPP3Q9NY33 737 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
CCDC84-209ENST00000580556 TDRD15B5MCY1 1934 aaKnown RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 GVINP1Q7Z2Y8 2422 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 PIRO00625 290 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 FSCN2O14926 492 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 B4GALT3O60512 393 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 WEE2P0C1S8 567 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 ATP1A3P13637 1013 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 CDK11BP21127 795 aaKnown RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 PNPLA4P41247 253 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 GCLMP48507 274 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 FMO5P49326 533 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 RBP5P82980 135 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 VWA3BQ502W6 1294 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 HSP90AA4PQ58FG1 418 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 SPOUT1Q5T280 376 aaKnown RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 C9orf57Q5W0N0 161 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
CCDC84-209ENST00000580556 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 NDST4Q9H3R1 872 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 VRTNQ9H8Y1 702 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 SORCS3Q9UPU3 1222 aa13.06□□□□□ -0.32
CCDC84-209ENST00000580556 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 PODXLO00592 558 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 PI15O43692 258 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC84-209ENST00000580556 KRT37O76014 449 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ITGB3P05106 788 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 GALTP07902 379 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ATICP31939 592 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 PPM1AP35813 382 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ALDH7A1P49419 539 aaKnown RBP13.05□□□□□ -0.32
CCDC84-209ENST00000580556 CLCNKBP51801 687 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 COPB1P53618 953 aaKnown RBP13.05□□□□□ -0.32
CCDC84-209ENST00000580556 BCAR1P56945 870 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 MYL7Q01449 175 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 CETN1Q12798 172 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 BIRC3Q13489 604 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 NCOA4Q13772 614 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 CBWD6Q4V339 395 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 CBWD3Q5JTY5 395 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 CBWD5Q5RIA9 395 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
CCDC84-209ENST00000580556 DCLRE1AQ6PJP8 1040 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 RNF214Q8ND24 703 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 TAF4BQ92750 862 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 RMDN1Q96DB5 314 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 ZNF560Q96MR9 790 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms