RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 TBX20Q9UMR3 447 aa14.29□□□□□ -0.12
TRAPPC8-207ENST00000580104 CSADQ9Y600 493 aa14.29□□□□□ -0.12
TRAPPC8-207ENST00000580104 KIAA0391O15091 583 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 CHI3L2Q15782 390 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 ANO5Q75V66 913 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 ALKBH8Q96BT7 664 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 TRPV6Q9H1D0 765 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 FNDC3AQ9Y2H6 1198 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 MTO1Q9Y2Z2 717 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 OCRLQ01968 901 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 DYNC1I2Q13409 638 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 AUHQ13825 339 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 LCA5Q86VQ0 697 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 TARS2Q9BW92 718 aaKnown RBP14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 OLFML3Q9NRN5 406 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 PPATQ06203 517 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 AP1B1Q10567 949 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 PRPSAP1Q14558 356 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 CNGA2Q16280 664 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 TMEM259Q4ZIN3 620 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 C11orf63Q6NUN7 778 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 EP400NLQ6ZTU2 488 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 FBXO36Q8NEA4 188 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 GTSE1Q9NYZ3 720 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 NINJ2Q9NZG7 142 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 USP20Q9Y2K6 914 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 SUGT1Q9Y2Z0 365 aa14.28□□□□□ -0.12
TRAPPC8-207ENST00000580104 PDGFRAP16234 1089 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 DLG4P78352 724 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 IL1RL1Q01638 556 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 Q3C1V9 767 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 SWT1Q5T5J6 900 aaKnown RBP14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 CDR2LQ86X02 465 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 RIT2Q99578 217 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 MRPL46Q9H2W6 279 aaKnown RBP14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 DGAT1O75907 488 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 PIAS1O75925 651 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 SLC4A1P02730 911 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 MYL2P10916 166 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 PRUNE1Q86TP1 453 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 SEPT12Q8IYM1 358 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 RNF149Q8NC42 400 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 AGAP3Q96P47 875 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 MYLK2Q9H1R3 596 aa14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 JPH1Q9HDC5 661 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC8-207ENST00000580104 GJB6O95452 261 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 GNAT1P11488 350 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 ORC1Q13415 861 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 NPY5RQ15761 445 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 STXBP2Q15833 593 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 HHIPL2Q6UWX4 724 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 PRELID2Q8N945 189 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 PSPC1Q8WXF1 523 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 C3P01024 1663 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 SLITRK3O94933 977 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 PKN2Q16513 984 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 CCDC33Q8N5R6 958 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 ALG3Q92685 438 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 E2F7Q96AV8 911 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 MIEF2Q96C03 454 aa14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.13
TRAPPC8-207ENST00000580104 PRKCIP41743 596 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 PHEXP78562 749 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 BTKQ06187 659 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 PIGHQ14442 188 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 KCTD2Q14681 263 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 DDX4Q9NQI0 724 aaKnown RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 CNGA3Q16281 694 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 PPIL6Q8IXY8 311 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 OLFM3Q96PB7 478 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 PURBQ96QR8 312 aaKnown RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 DCLRE1BQ9H816 532 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ARHGAP23Q9P227 1491 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 NOL4O94818 638 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 POU5F1BQ06416 359 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ATXN2LQ8WWM7 1075 aaKnown RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 PAFAH2Q99487 392 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ATRNO75882 1429 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 DNM1LO00429 736 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 AIM2O14862 343 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ATP9BO43861 1147 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 TCN1P20061 433 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ACCSLQ4AC99 568 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 DAB2IPQ5VWQ8 1189 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 ACAD11Q709F0 780 aa14.26□□□□□ -0.13
TRAPPC8-207ENST00000580104 SIX6OS1Q8N1H7 587 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms