RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-211ENST00000579316 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-211ENST00000579316 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
CSNK1D-211ENST00000579316 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 CDC45O75419 566 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 FGF19O95750 216 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 CPA1P15085 419 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 RPL9P32969 192 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 EVCP57679 992 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 IRX4P78413 519 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 UAP1L1Q3KQV9 507 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 C19orf48Q6RUI8 117 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 CYP2U1Q7Z449 544 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 GPIHBP1Q8IV16 184 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 FAM83CQ9BQN1 747 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 THG1LQ9NWX6 298 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 ASB3Q9Y575 518 aa15.18■□□□□ 0.02
CSNK1D-211ENST00000579316 MARCH6O60337 910 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 CCNT1O60563 726 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 DEXIO95424 95 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 EGFP01133 1207 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 CPB1P15086 417 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 DRD1P21728 446 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 GBP1P32455 592 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 EPHB3P54753 998 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 SIM1P81133 766 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 LMAN2Q12907 356 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 COL28A1Q2UY09 1125 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 FBXO43Q4G163 708 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 GPR158Q5T848 1215 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 DDX12PQ92771 950 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 BBC3Q96PG8 261 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 NUB1Q9Y5A7 615 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 ASXL3Q9C0F0 2248 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 KALRNO60229 2985 aa15.17■□□□□ 0.02
CSNK1D-211ENST00000579316 THADAQ6YHU6 1953 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 KIAA1549LQ6ZVL6 1849 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 SPAARA0A1B0GVQ0 90 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 OAZ2O95190 189 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 KCNE1P15382 129 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 GRM5P41594 1212 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 NAMPTP43490 491 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 SEMA3BQ13214 749 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 RUNX3Q13761 415 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 DMC1Q14565 340 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 ARHGAP15Q53QZ3 475 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 APBB1IPQ7Z5R6 666 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 RAB44Q7Z6P3 723 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 KCNB2Q92953 911 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 ACDQ96AP0 544 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 ZMAT2Q96NC0 199 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 TASP1Q9H6P5 420 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 CACNA2D2Q9NY47 1150 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
CSNK1D-211ENST00000579316 OTOL1A6NHN0 477 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 AMPD2Q01433 879 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 USP39Q53GS9 565 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 NT5DC1Q5TFE4 455 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 ATF7IP2Q5U623 682 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 DNAJB7Q7Z6W7 309 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 FBRSL1Q9HCM7 1045 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 GON4LQ3T8J9 2241 aa15.15■□□□□ 0.02
CSNK1D-211ENST00000579316 PI4KAP42356 2102 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 GABRR2P28476 465 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 MCM4P33991 863 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 ALDH1A3P47895 512 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 EFNA5P52803 228 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 SCAPQ12770 1279 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 DUSP4Q13115 394 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 GPR17Q13304 367 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 ZNF423Q2M1K9 1284 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 RASSF3Q86WH2 238 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 CEP120Q8N960 986 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 RPLP0P6Q8NHW5 317 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 DEPTORQ8TB45 409 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 ADAM32Q8TC27 787 aa15.14■□□□□ 0.01
CSNK1D-211ENST00000579316 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms