RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 LNX1Q8TBB1 728 aaPredicted RBP16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 B3GALT6Q96L58 329 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 TUBGCP2Q9BSJ2 902 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 XYLT2Q9H1B5 865 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 TSPY26PQ9H489 355 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 VRTNQ9H8Y1 702 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 RXFP1Q9HBX9 757 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 OAZ2O95190 189 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 CYP11A1P05108 521 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 TPM4P67936 248 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 MYL7Q01449 175 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 MRPL58Q14197 206 aaKnown RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 IQCB1Q15051 598 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 PSMD5Q16401 504 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 VARS2Q5ST30 1063 aaKnown RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 THEM5Q8N1Q8 247 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 TMEM86AQ8N2M4 240 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 TOP6BLQ8N6T0 577 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 KLHL5Q96PQ7 755 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 TLE6Q9H808 572 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 BACE2Q9Y5Z0 518 aa16.71■□□□□ 0.27
SLC6A4-205ENST00000579221 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 KLRC2P26717 231 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 ZNF445P59923 1031 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 CTXN3Q4LDR2 81 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 WSCD1Q658N2 575 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 OVOS1Q6IE37 1185 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 SEMA4DQ92854 862 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 CDCA3Q99618 268 aaPredicted RBP16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 ANP32EQ9BTT0 268 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 PI4K2AQ9BTU6 479 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
SLC6A4-205ENST00000579221 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 GOLGA6L19H0YKK7 550 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 NCK2O43639 380 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 CNPP09543 421 aaKnown RBP16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 LHX1P48742 406 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 SOWAHAQ2M3V2 549 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 TCEAL5Q5H9L2 206 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 PPFIBP1Q86W92 1011 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 PDCL2Q8N4E4 241 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 EHBP1Q8NDI1 1231 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 FAM200AQ8TCP9 573 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 FAXDC2Q96IV6 333 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 NDST4Q9H3R1 872 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 MTRRQ9UBK8 725 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 L1RE1Q9UN81 338 aa16.69■□□□□ 0.26
SLC6A4-205ENST00000579221 PLXNA4Q9HCM2 1894 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 LRRC10BA6NIK2 292 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 OR6C75A6NL08 312 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 PER2O15055 1255 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 TEX28O15482 410 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 CLASP2O75122 1294 aaKnown RBP16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 TACC1O75410 805 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 ADH1AP07327 375 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 ZNF18P17022 549 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 NRIP1P48552 1158 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 NDUFV1P49821 464 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 KRT31Q15323 416 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 DUSP6Q16828 381 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 SPOPLQ6IQ16 392 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 ADGRD2Q7Z7M1 963 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 LUZP1Q86V48 1076 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 VPS16Q9H269 839 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 POLIQ9UNA4 740 aa16.68■□□□□ 0.26
SLC6A4-205ENST00000579221 GTPBP10A4D1E9 387 aaKnown RBP16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 TBC1D4O60343 1298 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 C1RP00736 705 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 WARSP23381 471 aaKnown RBP16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 OR1D2P34982 312 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 GNL1P36915 607 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms