RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 TCEAL3Q969E4 200 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 MTMR9Q96QG7 549 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TMEM209Q96SK2 561 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
BRIP1-204ENST00000579028 DUSP15Q9H1R2 295 aaPredicted RBP9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 TPCN1Q9ULQ1 816 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 SLC8A2Q9UPR5 921 aa9.52□□□□□ -0.89
BRIP1-204ENST00000579028 CITO14578 2027 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 BCLAF3A2AJT9 711 aaKnown RBP9.51□□□□□ -0.89
BRIP1-204ENST00000579028 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 WNT7AO00755 349 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 NEMFO60524 1076 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 MED24O75448 989 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 CAVIN2O95810 425 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 CEACAM1P13688 526 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 SPINK2P20155 84 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 CSRP1P21291 193 aaKnown RBP9.51□□□□□ -0.89
BRIP1-204ENST00000579028 WEE1P30291 646 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 MCM4P33991 863 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 EPHB3P54753 998 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 TNK2Q07912 1038 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 PTPAQ15257 358 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 ELF2Q15723 593 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 ITPRIPL2Q3MIP1 535 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 FSTL4Q6MZW2 842 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 GAREM2Q75VX8 874 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 GPIHBP1Q8IV16 184 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 BPIFB1Q8TDL5 484 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
BRIP1-204ENST00000579028 POLR3CQ9BUI4 534 aaPredicted RBP9.51□□□□□ -0.89
BRIP1-204ENST00000579028 CRISPLD1Q9H336 500 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 PTPRHQ9HD43 1115 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 ASB3Q9Y575 518 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 SDK1Q7Z5N4 2213 aa9.51□□□□□ -0.89
BRIP1-204ENST00000579028 LNP1A1A4G5 178 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ARHGEF35A5YM69 484 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 K7ERI5 159 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 M0QZQ0 153 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ABLIM1O14639 778 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 TRDMT1O14717 391 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 MEFVO15553 781 aaPredicted RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 RHOBTB1O94844 696 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 OAZ2O95190 189 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 PRAMEF12O95522 483 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 FGF19O95750 216 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 TOP3BO95985 862 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 KRT2P35908 639 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ALDH1A3P47895 512 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 MCM2P49736 904 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 OSTNP61366 133 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 YWHAHQ04917 246 aaPredicted RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 RING1Q06587 406 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 SCRN1Q12765 414 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 DUSP4Q13115 394 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 GPR17Q13304 367 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 KARSQ15046 597 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ARHGAP15Q53QZ3 475 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 GPR158Q5T848 1215 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 DNAJB7Q7Z6W7 309 aaPredicted RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 SKAP1Q86WV1 359 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ZCCHC14Q8WYQ9 949 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 KIFAP3Q92845 792 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 PSMG2Q969U7 264 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 C18orf25Q96B23 403 aaPredicted RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 CHFRQ96EP1 664 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ACAP3Q96P50 834 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ACO2Q99798 780 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 SCNM1Q9BWG6 230 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 ATXN3LQ9H3M9 355 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 THG1LQ9NWX6 298 aaKnown RBP9.5□□□□□ -0.89
BRIP1-204ENST00000579028 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 PHLPP2Q6ZVD8 1323 aa9.5□□□□□ -0.89
BRIP1-204ENST00000579028 OR6C75A6NL08 312 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 REC8O95072 547 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 OR4Q2P0C623 313 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 MCF2P10911 925 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 MUTP22033 750 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 PROZP22891 400 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 RPA1P27694 616 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 GABRR2P28476 465 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 MARCKSP29966 332 aaPredicted RBP9.49□□□□□ -0.89
BRIP1-204ENST00000579028 AARSP49588 968 aaKnown RBP eCLIP9.49□□□□□ -0.89
BRIP1-204ENST00000579028 CREB5Q02930 508 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 CENPPQ6IPU0 288 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 RNF25Q96BH1 459 aaPredicted RBP9.49□□□□□ -0.89
BRIP1-204ENST00000579028 PGLYRP2Q96PD5 576 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
BRIP1-204ENST00000579028 FAM83CQ9BQN1 747 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms