RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PRDM5Q9NQX1 630 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 OLFML3Q9NRN5 406 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 AGPAT5Q9NUQ2 364 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PADI3Q9ULW8 664 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ST3GAL5Q9UNP4 418 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 MYH10P35580 1976 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PHLPP2Q6ZVD8 1323 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CNTNAP2Q9UHC6 1331 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 KIF26AQ9ULI4 1882 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 HELZP42694 1942 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 DOCK8Q8NF50 2099 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PRRC2BQ5JSZ5 2229 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 A0A1B0GUA9 196 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MEIS3P2A8K0S8 358 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 TISP43B9A030 160 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 SOX1O00570 391 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ENPP3O14638 875 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 INPPL1O15357 1258 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 SLC16A4O15374 487 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ASAP2O43150 1006 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 B4GALT3O60512 393 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF202O95125 648 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PARNO95453 639 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MYBP10242 640 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ARF4P18085 180 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 NCLP19338 710 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 NMT1P30419 496 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 SYKP43405 635 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PEX3P56589 373 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 UBE2HP62256 183 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 HTRA4P83105 476 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 GTF2BQ00403 316 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 KCNA1Q09470 495 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 RAD51AP2Q09MP3 1159 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 COASYQ13057 564 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PPIGQ13427 754 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MXD4Q14582 209 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ZRSR1Q15695 479 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 NAB2Q15742 525 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 BMT2Q1RMZ1 405 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 C11orf91Q3C1V1 193 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ZCWPW2Q504Y3 356 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ZC2HC1CQ53FD0 456 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM102BQ5T8I3 360 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ADAMTSL4Q6UY14 1074 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 UNC13DQ70J99 1090 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MAEAQ7L5Y9 396 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 DYMQ7RTS9 669 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 SRGAP1Q7Z6B7 1085 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 TMCO2Q7Z6W1 182 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 DEFB128Q7Z7B8 93 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MRPL10Q7Z7H8 261 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 SFR1Q86XK3 245 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 RHPN2Q8IUC4 686 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 EXOC8Q8IYI6 725 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 METTL13Q8N6R0 699 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 IQUBQ8NA54 791 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 USP38Q8NB14 1042 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 RNF149Q8NC42 400 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 RETREG2Q8NC44 543 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 GSTCDQ8NEC7 633 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 DPF3Q92784 378 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 KIFAP3Q92845 792 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF689Q96CS4 500 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 LIN37Q96GY3 246 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 DRC1Q96MC2 740 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 NLRP4Q96MN2 994 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 JPH2Q9BR39 696 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PBX4Q9BYU1 374 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 IFIH1Q9BYX4 1025 aaKnown RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 GZF1Q9H116 711 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 BLZF1Q9H2G9 400 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 PDZD7Q9H5P4 517 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 C17orf75Q9HAS0 396 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 RGS18Q9NS28 235 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 USP25Q9UHP3 1055 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 AKT3Q9Y243 479 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 NR2E3Q9Y5X4 410 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 KCNMB2Q9Y691 235 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 STYXL1Q9Y6J8 313 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 MYO16Q9Y6X6 1858 aa4.17□□□□□ -1.74
SMARCE1-215ENST00000578995 A0A0U1RQF3 1178 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 ABHD14A-ACY1A0A1B0GW23 586 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 PVALEFA0A1B0GWK0 134 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 A0A1W2PPC1 479 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 LCHNA4D1U4 455 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 ANKRD63C9JTQ0 380 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 ACKR2O00590 384 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 TGFB1I1O43294 461 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF623O75123 536 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 PRPF40AO75400 957 aaKnown RBP4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 RPS6KA5O75582 802 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 DGKIO75912 1065 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 BAIAP3O94812 1187 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 RHOBTB3O94955 611 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 EFEMP2O95967 443 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 SSBP05455 408 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 PRKCBP05771 671 aa4.16□□□□□ -1.74
SMARCE1-215ENST00000578995 MYL1P05976 194 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms