RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 ARID2Q68CP9 1835 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 HELZP42694 1942 aaKnown RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 NBPF19A0A087WUL8 3843 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 LRRK2Q5S007 2527 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 SF3B1O75533 1304 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBB-208ENST00000578706 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 MSH4O15457 936 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 PPP6R2O75170 966 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 RHOBTB1O94844 696 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ERLIN2O94905 339 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 STBD1O95210 358 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 KIF4AO95239 1232 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 GJA1P17302 382 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ENGP17813 658 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 XBP1P17861 261 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 GNA11P29992 359 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 OR1D2P34982 312 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 CLCN1P35523 988 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 AKAP17AQ02040 695 aaKnown RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 CEBPZQ03701 1054 aaKnown RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 FCHO2Q0JRZ9 810 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 SLC39A14Q15043 492 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 PCBP1Q15365 356 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBB-208ENST00000578706 FAM171A1Q5VUB5 890 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 LRCH2Q5VUJ6 765 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 FSTL4Q6MZW2 842 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 PDXDC1Q6P996 788 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 C1orf228Q6PIY5 440 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 RTL10Q7L3V2 364 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 MIER3Q7Z3K6 550 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ZSCAN30Q86W11 494 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 RALGPS2Q86X27 583 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 CEP57Q86XR8 500 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 MARCH9Q86YJ5 346 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 HS6ST3Q8IZP7 471 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 FSIP1Q8NA03 581 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 DAGLBQ8NCG7 672 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ENGASEQ8NFI3 743 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 RDM1Q8NG50 284 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ZSCAN18Q8TBC5 510 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 FAM200AQ8TCP9 573 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 HASPINQ8TF76 798 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 CCDC12Q8WUD4 166 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 PRPF31Q8WWY3 499 aaKnown RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 ZFYVE19Q96K21 471 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 CAMK1GQ96NX5 476 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 CORO1BQ9BR76 489 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 TTPALQ9BTX7 342 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 APOL6Q9BWW8 343 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 TEKT3Q9BXF9 490 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 EIF2AQ9BY44 585 aaKnown RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 TRIM6Q9C030 488 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 FOXP1Q9H334 677 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 C8orf33Q9H7E9 229 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 FSCN3Q9NQT6 498 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 TMEM74BQ9NUR3 256 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 EVLQ9UI08 416 aaPredicted RBP6.88□□□□□ -1.31
UBB-208ENST00000578706 PCDHA7Q9UN72 937 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 GIT1Q9Y2X7 761 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 PLXND1Q9Y4D7 1925 aa6.88□□□□□ -1.31
UBB-208ENST00000578706 ESYT2A0FGR8 921 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 ARHGEF37A1IGU5 675 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 CHADO15335 359 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 ASAP2O43150 1006 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 KRT38O76015 456 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 MICAL2O94851 1124 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 FTH1P19P0C7X4 201 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 CD59P13987 128 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 PTPN2P17706 415 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 CMA1P23946 247 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 ITPKBP27987 946 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 AXLP30530 894 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 USP11P51784 963 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 KPNA1P52294 538 aaPredicted RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 PSMC5P62195 406 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 TNK2Q07912 1038 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 FUT2Q10981 343 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 KARSQ15046 597 aaKnown RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 CAMK4Q16566 473 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 STX1AQ16623 288 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 PFKFB3Q16875 520 aaPredicted RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 TRIM61Q5EBN2 209 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 NOTUMQ6P988 496 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 ANO5Q75V66 913 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 CYP2U1Q7Z449 544 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 NOSTRINQ8IVI9 506 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 SCUBE3Q8IX30 993 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 FMR1NBQ8N0W7 255 aaPredicted RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 CAMKK1Q8N5S9 505 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 LSM14AQ8ND56 463 aaKnown RBP6.87□□□□□ -1.31
UBB-208ENST00000578706 OR2I1PQ8NGU4 316 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 CSGALNACT1Q8TDX6 532 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 SLC5A5Q92911 643 aa6.87□□□□□ -1.31
UBB-208ENST00000578706 LENG9Q96B70 501 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms