RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 SERTAD1Q9UHV2 236 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 ATP6V1DQ9Y5K8 247 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 CYB561D2O14569 222 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 TGFB1I1O43294 461 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 ACTN4O43707 911 aaKnown RBP24.8■■□□□ 1.56
VAPA-205ENST00000578314 NARSO43776 548 aaKnown RBP24.8■■□□□ 1.56
VAPA-205ENST00000578314 OR4Q2P0C623 313 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 PNPLA4P41247 253 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 PTPN5P54829 565 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 SNRPFP62306 86 aaKnown RBP24.8■■□□□ 1.56
VAPA-205ENST00000578314 CXorf38Q8TB03 319 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 SCFD1Q8WVM8 642 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 PDE11AQ9HCR9 933 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 HPSEQ9Y251 543 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 MRPS23Q9Y3D9 190 aaKnown RBP24.8■■□□□ 1.56
VAPA-205ENST00000578314 NUMBLQ9Y6R0 609 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 UBE4BO95155 1302 aa24.8■■□□□ 1.56
VAPA-205ENST00000578314 ZNF233A6NK53 670 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 KPNA7A9QM74 516 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 MICAL2O94851 1124 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 SRFP11831 508 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 PFKFB1P16118 471 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 MRE11P49959 708 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 SLC5A9Q2M3M2 681 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 PARM1Q6UWI2 310 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 NPAS3Q8IXF0 933 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 GRAMD1CQ8IYS0 662 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 C1orf127Q8N9H9 656 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 FGF14Q92915 247 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 PAGE5Q96GU1 130 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 CORO1BQ9BR76 489 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 KIAA1586Q9HCI6 787 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 GDE1Q9NZC3 331 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 HSPBP1Q9NZL4 362 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 CEP72Q9P209 647 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 WNT16Q9UBV4 365 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 USP25Q9UHP3 1055 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 DOCK8Q8NF50 2099 aa24.79■■□□□ 1.56
VAPA-205ENST00000578314 FAM237AA0A1B0GTK4 181 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 A0A1B0GVL5 298 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 TWF1Q12792 350 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 TCF15Q12870 199 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 BMT2Q1RMZ1 405 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 SV2CQ496J9 727 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 PRSS36Q5K4E3 855 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 CENPPQ6IPU0 288 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 MTSS1LQ765P7 747 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 METTL23Q86XA0 190 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 ELMOD1Q8N336 334 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 ZNF512Q96ME7 567 aaPredicted RBP24.78■■□□□ 1.56
VAPA-205ENST00000578314 ZNF560Q96MR9 790 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 PGLYRP2Q96PD5 576 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 RTP3Q9BQQ7 232 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 RPP25Q9BUL9 199 aaKnown RBP24.78■■□□□ 1.56
VAPA-205ENST00000578314 SCAND2PQ9GZW5 306 aaPredicted RBP24.78■■□□□ 1.56
VAPA-205ENST00000578314 CRISPLD1Q9H336 500 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 AGPAT3Q9NRZ7 376 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 ITGA11Q9UKX5 1188 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 AGAP1Q9UPQ3 857 aa24.78■■□□□ 1.56
VAPA-205ENST00000578314 ZNF197O14709 1029 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 KLRC4O43908 158 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 POLR2BP30876 1174 aaKnown RBP24.77■■□□□ 1.56
VAPA-205ENST00000578314 NUBP1P53384 320 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 DUSP4Q13115 394 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 IQCEQ6IPM2 695 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 CBWD2Q8IUF1 395 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 LRRC52Q8N7C0 313 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 OR10T2Q8NGX3 314 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 NOC3LQ8WTT2 800 aaKnown RBP24.77■■□□□ 1.56
VAPA-205ENST00000578314 TMEM209Q96SK2 561 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 ZCWPW1Q9H0M4 648 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 SLC39A2Q9NP94 309 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 SLC2A4RGQ9NR83 387 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 HSFX1Q9UBD0 423 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 FBXL21Q9UKT6 434 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 YIPF1Q9Y548 306 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 DOCK6Q96HP0 2047 aa24.77■■□□□ 1.56
VAPA-205ENST00000578314 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.76■■□□□ 1.55
VAPA-205ENST00000578314 MTMR11A4FU01 709 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 ITGB3P05106 788 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 EPHA5P54756 1037 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 SURF1Q15526 300 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 CYP4A22Q5TCH4 519 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 WSCD1Q658N2 575 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 THEM5Q8N1Q8 247 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 CSGALNACT2Q8N6G5 542 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 ATAD1Q8NBU5 361 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 LEMD2Q8NC56 503 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 ST13P5Q8NFI4 369 aaPredicted RBP24.76■■□□□ 1.55
VAPA-205ENST00000578314 ING5Q8WYH8 240 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 INTS13Q9NVM9 706 aa24.76■■□□□ 1.55
VAPA-205ENST00000578314 ANK1P16157 1881 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 NOTCH4Q99466 2003 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 TULP1O00294 542 aaPredicted RBP24.75■■□□□ 1.55
VAPA-205ENST00000578314 MYL1P05976 194 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 CFHP08603 1231 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 NPR3P17342 541 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 CLCN5P51795 746 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 RBP5P82980 135 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 PLD1Q13393 1074 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms