RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CCDC39Q9UFE4 941 aa18.04■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-206ENST00000578018 R4GN57 208 aa18.04■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ANO9A1A5B4 782 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 MTMR11A4FU01 709 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SHISA7A6NL88 538 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 FAM170BA6NMN3 283 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 PIRO00625 290 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ODC1P11926 461 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 MYL4P12829 197 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 GJA1P17302 382 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SYT1P21579 422 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 PAX3P23760 479 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 DUSP4Q13115 394 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 PLD1Q13393 1074 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 MYBPC2Q14324 1141 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SLFN12LQ6IEE8 588 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ZNF720Q7Z2F6 126 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TMC8Q8IU68 726 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ADSSL1Q8N142 457 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SHKBP1Q8TBC3 707 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SMARCD2Q92925 531 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 LRRC3Q9BY71 257 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ASB7Q9H672 318 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 AGO2Q9UKV8 859 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
CDK5RAP3-206ENST00000578018 CEP250Q9BV73 2442 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 NCANO14594 1321 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 MYMKA6NI61 221 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TARSP26639 723 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 MAGEA9P43362 315 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TEAD2Q15562 447 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 CENPPQ6IPU0 288 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 ZC3H14Q6PJT7 736 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 VITQ6UXI7 678 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TTC9BQ8N6N2 239 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 OR10T2Q8NGX3 314 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 NUP210Q8TEM1 1887 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 DNAJC19Q96DA6 116 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TMEM209Q96SK2 561 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 STRA6Q9BX79 667 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 TRPV4Q9HBA0 871 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 SEL1LQ9UBV2 794 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 FRYLO94915 3013 aa18.02■□□□□ 0.48
CDK5RAP3-206ENST00000578018 DCHS1Q96JQ0 3298 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CACNA1AO00555 2505 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 LMNAP02545 664 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CYP11A1P05108 521 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ADSSP30520 456 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 TXLNAP40222 546 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 POU5F1Q01860 360 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CEBPZQ03701 1054 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 RRAGBQ5VZM2 374 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CRELD2Q6UXH1 353 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ZNF852Q6ZMS4 543 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 EFCAB13Q8IY85 973 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ATAD1Q8NBU5 361 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ZSCAN18Q8TBC5 510 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 POMGNT1Q8WZA1 660 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CLDN23Q96B33 292 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 TRMT61BQ9BVS5 477 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 BRD9Q9H8M2 597 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 SPATA6Q9NWH7 488 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 MTMR6Q9Y217 621 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 SLC27A5Q9Y2P5 690 aa18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-206ENST00000578018 A0A1W2PRU2 124 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 GAP43P17677 238 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 PSMC3P17980 439 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 VIPR2P41587 438 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 EPHB3P54753 998 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 KCNA1Q09470 495 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 SV2BQ7L1I2 683 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 DEPDC1BQ8WUY9 529 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 IRF7Q92985 503 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 USP28Q96RU2 1077 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 NELL2Q99435 816 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 MRPL44Q9H9J2 332 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 DPP3Q9NY33 737 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
CDK5RAP3-206ENST00000578018 DMXL1Q9Y485 3027 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 LAMTOR5O43504 91 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 SOAT2O75908 522 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 GDI1P31150 447 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 RPS9P46781 194 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ALDH1A3P47895 512 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 TAF6P49848 677 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 CASP5P51878 434 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 POSTNQ15063 836 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ZNF528Q3MIS6 628 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 L1TD1Q5T7N2 865 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ARMCX5Q6P1M9 558 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ZNF687Q8N1G0 1237 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 KCNG4Q8TDN1 519 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 PSMG2Q969U7 264 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 GPR88Q9GZN0 384 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 SLITRK6Q9H5Y7 841 aa17.99■□□□□ 0.47
CDK5RAP3-206ENST00000578018 ZNF334Q9HCZ1 680 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms