RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 GPR158Q5T848 1215 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 PMS2CLQ68D20 193 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 GALNT17Q6IS24 598 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 APPL2Q8NEU8 664 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 PIGOQ8TEQ8 1089 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 ATXN3LQ9H3M9 355 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 SLC38A7Q9NVC3 462 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 EBF1Q9UH73 591 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 INVSQ9Y283 1065 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 H0Y626 953 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 TRDMT1O14717 391 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 TRIM16O95361 564 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 BAG4O95429 457 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 CAPNS1P04632 268 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 EDN1P05305 212 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 MCM2P49736 904 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 DGKEP52429 567 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 CCT2P78371 535 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 GAREM2Q75VX8 874 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 C11orf74Q86VG3 221 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 HSD17B14Q9BPX1 270 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 DNAJC25Q9H1X3 360 aa15.46■□□□□ 0.07
PPP4R1-206ENST00000577779 A0A087WWV3 80 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 MAPK8P45983 427 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 ALDH1A3P47895 512 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 YARSP54577 528 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 LMAN2Q12907 356 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 USP39Q53GS9 565 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 SYT13Q7L8C5 426 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 APBB1IPQ7Z5R6 666 aaPredicted RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 CHCHD4Q8N4Q1 142 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 RPLP0P6Q8NHW5 317 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 PIGKQ92643 395 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 SUSD3Q96L08 255 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 BBC3Q96PG8 261 aaPredicted RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 NAP1L4Q99733 375 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 CCDC113Q9H0I3 377 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 TOPORSQ9NS56 1045 aaPredicted RBP15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 GON4LQ3T8J9 2241 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 ASXL3Q9C0F0 2248 aa15.45■□□□□ 0.06
PPP4R1-206ENST00000577779 FAM221BA6H8Z2 402 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DEXIO95424 95 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 FGF19O95750 216 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 ATP2B1P20020 1258 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DRD1P21728 446 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 GABRR2P28476 465 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 MARCKSP29966 332 aaPredicted RBP15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 MCM4P33991 863 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DHPSP49366 369 aaPredicted RBP15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 AMPD2Q01433 879 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DUSP4Q13115 394 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 RUNX3Q13761 415 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DMC1Q14565 340 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 ATF7IP2Q5U623 682 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 BEST2Q8NFU1 509 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 BSNDQ8WZ55 320 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DDX12PQ92771 950 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 CHFRQ96EP1 664 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 NUSAP1Q9BXS6 441 aaKnown RBP15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 SMG9Q9H0W8 520 aaKnown RBP15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 CRISPLD1Q9H336 500 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 ASB3Q9Y575 518 aa15.44■□□□□ 0.06
PPP4R1-206ENST00000577779 PI4KAP42356 2102 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 VNN2O95498 520 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 WEE1P30291 646 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 RPL9P32969 192 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 OSTNP61366 133 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 SCAPQ12770 1279 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 FBXO43Q4G163 708 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 TRIM61Q5EBN2 209 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 ALKAL1Q6UXT8 129 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 DNAJB7Q7Z6W7 309 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 PIP4P1Q86T03 277 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 FAM177A1Q8N128 213 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 PSMG2Q969U7 264 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 ACDQ96AP0 544 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 JAKMIP1Q96N16 626 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 TBC1D32Q96NH3 1257 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 FAM83CQ9BQN1 747 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 EBF3Q9H4W6 596 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 TASP1Q9H6P5 420 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 FBRSL1Q9HCM7 1045 aaKnown RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 HPS4Q9NQG7 708 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 EVLQ9UI08 416 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 KCNJ14Q9UNX9 436 aa15.43■□□□□ 0.06
PPP4R1-206ENST00000577779 OTOL1A6NHN0 477 aaPredicted RBP15.42■□□□□ 0.06
PPP4R1-206ENST00000577779 OR4Q2P0C623 313 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms