RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 NTPCRQ9BSD7 190 aaKnown RBP10.98□□□□□ -0.65
SS18-207ENST00000577636 EDEM3Q9BZQ6 932 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
SS18-207ENST00000577636 SEMA4AQ9H3S1 761 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 RSAD1Q9HA92 442 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 GPRC5CQ9NQ84 441 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 SPTLC3Q9NUV7 552 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 CAPN11Q9UMQ6 739 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 TBX20Q9UMR3 447 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
SS18-207ENST00000577636 MYH9P35579 1960 aaKnown RBP10.97□□□□□ -0.65
SS18-207ENST00000577636 TEX28O15482 410 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 TGFB1I1O43294 461 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 LILRB3O75022 631 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 ZNF623O75123 536 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 PPP1R37O75864 691 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 STBD1O95210 358 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
SS18-207ENST00000577636 GLUD1P00367 558 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 HOXD13P35453 343 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 NAMPTP43490 491 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 RAB27AP51159 221 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 CYP2J2P51589 502 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 ZBED6P86452 979 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 INTS8Q75QN2 995 aaKnown RBP10.97□□□□□ -0.65
SS18-207ENST00000577636 GET4Q7L5D6 327 aaPredicted RBP10.97□□□□□ -0.65
SS18-207ENST00000577636 ZNF410Q86VK4 478 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 XXYLT1Q8NBI6 393 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 FIZ1Q96SL8 496 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 STRA6Q9BX79 667 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
SS18-207ENST00000577636 ABHD10Q9NUJ1 306 aa10.97□□□□□ -0.65
SS18-207ENST00000577636 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 CLUHO75153 1309 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 LRRIQ4A6NIV6 560 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
SS18-207ENST00000577636 AKAP3O75969 853 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 SOD2P04179 222 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 TUBB4AP04350 444 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 ADH1AP07327 375 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 SP9P0CG40 484 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 SRFP11831 508 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 EFNA5P52803 228 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 KCNA1Q09470 495 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 TFDP1Q14186 410 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 MXD4Q14582 209 aaPredicted RBP10.96□□□□□ -0.65
SS18-207ENST00000577636 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
SS18-207ENST00000577636 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 ZC3H14Q6PJT7 736 aaKnown RBP10.96□□□□□ -0.65
SS18-207ENST00000577636 MAP4K3Q8IVH8 894 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 RSPH1Q8WYR4 309 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 RPS6KC1Q96S38 1066 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 APOL6Q9BWW8 343 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 FOXQ1Q9C009 403 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 DHX33Q9H6R0 707 aaKnown RBP10.96□□□□□ -0.65
SS18-207ENST00000577636 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 STK39Q9UEW8 545 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.65
SS18-207ENST00000577636 VPS13AQ96RL7 3174 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 K7ERI5 159 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 MAPK13O15264 365 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 LRRN2O75325 713 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 CCDC175P0C221 793 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 ITGA4P13612 1032 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 GLUD2P49448 558 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 LIG4P49917 911 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 RSPO4Q2I0M5 234 aaPredicted RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 GBP6Q6ZN66 633 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 MRPL10Q7Z7H8 261 aaKnown RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 FMNL3Q8IVF7 1028 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 ZBTB8OSQ8IWT0 167 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 CCAR2Q8N163 923 aaKnown RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
SS18-207ENST00000577636 RUBCNQ92622 972 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 TMEM143Q96AN5 459 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 B3GALT6Q96L58 329 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 DNAJC7Q99615 494 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 C2orf40Q9H1Z8 148 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 KIAA1586Q9HCI6 787 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 XPNPEP1Q9NQW7 623 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
SS18-207ENST00000577636 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms