RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 HSP90AA5PQ58FG0 334 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 TTC27Q6P3X3 843 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
CCDC40-212ENST00000574799 FRMD5Q7Z6J6 570 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 PRUNE1Q86TP1 453 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 NCAPG2Q86XI2 1143 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 CYP4X1Q8N118 509 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 JDP2Q8WYK2 163 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 CCDC124Q96CT7 223 aaKnown RBP10.12□□□□□ -0.79
CCDC40-212ENST00000574799 CCDC17Q96LX7 622 aa10.12□□□□□ -0.79
CCDC40-212ENST00000574799 RBM15Q96T37 977 aaKnown RBP eCLIP10.12□□□□□ -0.79
CCDC40-212ENST00000574799 MYH11P35749 1972 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 A6NJR5 290 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DDX3YO15523 660 aaKnown RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ATP6V1B1P15313 513 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 HOXD13P35453 343 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 NEK3P51956 506 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 EPHB1P54762 984 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 OCRLQ01968 901 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MYBPC3Q14896 1274 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 IZUMO3Q5VZ72 239 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SLFN13Q68D06 897 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TMEM179Q6ZVK1 233 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MYCT1Q8N699 235 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SLC26A7Q8TE54 656 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SEC14L1Q92503 715 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DNAJC1Q96KC8 554 aaKnown RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TMEM109Q9BVC6 243 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 OCEL1Q9H607 264 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 UBE2TQ9NPD8 197 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TAS2R14Q9NYV8 317 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SSC5DA1L4H1 1573 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 LOXHD1Q8IVV2 1947 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TCRBV7S2A1N4TA0A589 114 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 NFKBIEO00221 500 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 PGM3O95394 542 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SPATA31C1P0DKV0 1188 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MAGEA8P43361 318 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 AP1B1Q10567 949 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 CYLC2Q14093 348 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 PDIA5Q14554 519 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DPY19L2P1Q6NXN4 242 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 LNX1Q8TBB1 728 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MTBPQ96DY7 904 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TUBGCP5Q96RT8 1024 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TXLNGYQ9BZA5 131 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 VAV3Q9UKW4 847 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 IGSF9BQ9UPX0 1349 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 DNAJC6O75061 913 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 AKAP3O75969 853 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 GGPS1O95749 300 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 VAV1P15498 845 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ANXA13P27216 316 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 STAT3P40763 770 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 NR1H3Q13133 447 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ACVR2BQ13705 512 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 KAZNQ674X7 775 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 SLFN11Q7Z7L1 901 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 RBM12BQ8IXT5 1001 aaKnown RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ENDOVQ8N8Q3 282 aaKnown RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 GSDMBQ8TAX9 411 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 CADM1Q9BY67 442 aaKnown RBP10.11□□□□□ -0.79
CCDC40-212ENST00000574799 PHACTR1Q9C0D0 580 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 NINJ2Q9NZG7 142 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ARMCX1Q9P291 453 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF148Q9UQR1 794 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 STXBP5LQ9Y2K9 1186 aa10.11□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF536O15090 1300 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 TCP10L2B9ZVM9 353 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 I3L4J1 428 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 MED24O75448 989 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 HLA-DOAP06340 250 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PSMC2P35998 433 aaKnown RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PSMC6P62333 389 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 MYL7Q01449 175 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 POU5F1Q01860 360 aaKnown RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ABCB5Q2M3G0 1257 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SH3TC2Q8TF17 1288 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 WDR60Q8WVS4 1066 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ART4Q93070 314 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 BORCS6Q96GS4 357 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 WNT8AQ9H1J5 351 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF212Q9UDV6 495 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PRKAG3Q9UGI9 489 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 MTM1Q13496 603 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 EDRF1Q3B7T1 1238 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 CLNKQ7Z7G1 428 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms