RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CETN1Q12798 172 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 MARK2Q7KZI7 788 aaKnown RBP15.21■□□□□ 0.03
SMG6-215ENST00000574501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMG6-215ENST00000574501 ANKS1BQ7Z6G8 1248 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 LCA5Q86VQ0 697 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 NCAPG2Q86XI2 1143 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 FAM71AQ8IYT1 594 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
SMG6-215ENST00000574501 TSSK1BQ9BXA7 367 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 VAV3Q9UKW4 847 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 COMMD3-BMI1R4GMX3 469 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 A8MXQ7 604 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 GOLGA8SH3BPF8 625 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 GOLGA8MH3BSY2 632 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 FDX1P10109 184 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 CYP11B1P15538 503 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 VAMP7P51809 220 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 CDC16Q13042 620 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 PDIA2Q13087 525 aaKnown RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 RIPOR1Q6ZS17 1223 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 ALYREFQ86V81 257 aaKnown RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 NMD3Q96D46 503 aaKnown RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 DDX27Q96GQ7 796 aaKnown RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 HIC2Q96JB3 615 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 MMADHCQ9H3L0 296 aaPredicted RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 RHBDL2Q9NX52 303 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 BTG4Q9NY30 223 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 STK32BQ9NY57 414 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 PSMC3IPQ9P2W1 217 aaPredicted RBP15.21■□□□□ 0.02
SMG6-215ENST00000574501 PPM1HQ9ULR3 514 aa15.21■□□□□ 0.02
SMG6-215ENST00000574501 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 SLURP2P0DP57 97 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 IMPDH2P12268 514 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 CENPCQ03188 943 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 KLF1Q13351 362 aaPredicted RBP15.2■□□□□ 0.02
SMG6-215ENST00000574501 MTM1Q13496 603 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 PANX3Q96QZ0 392 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 NMUR2Q9GZQ4 415 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 ARHGEF4Q9NR80 690 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 NDE1Q9NXR1 346 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 SPATA31A5Q5VU36 1347 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 SPATA31A6Q5VVP1 1343 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 SPATA31A7Q8IWB4 1347 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 IRS2Q9Y4H2 1338 aa15.2■□□□□ 0.02
SMG6-215ENST00000574501 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
SMG6-215ENST00000574501 FCHO1O14526 889 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 OR6B1O95007 311 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 ENO1P06733 434 aaKnown RBP15.19■□□□□ 0.02
SMG6-215ENST00000574501 FAM200BP0CF97 657 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 CD58P19256 250 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 GRIA2P42262 883 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 ARL4CP56559 192 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 RHBDL3P58872 404 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 CCNG2Q16589 344 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 RAPH1Q70E73 1250 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 SPATA24Q86W54 205 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 NAT14Q8WUY8 206 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 KLHL11Q9NVR0 708 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 MYL2P10916 166 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 USH1GQ495M9 461 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 Q4G0T1 1027 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 C1orf220Q5T0J3 134 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 KAZNQ674X7 775 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 SATL1Q86VE3 508 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 ST13P4Q8IZP2 240 aaPredicted RBP15.19■□□□□ 0.02
SMG6-215ENST00000574501 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
SMG6-215ENST00000574501 ATRNL1Q5VV63 1379 aa15.19■□□□□ 0.02
SMG6-215ENST00000574501 FAM237BA0A1B0GVD1 139 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 SLITRK3O94933 977 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 PENKP01210 267 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 GYS1P13807 737 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 CRABP2P29373 138 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 GPS1Q13098 491 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 RASA2Q15283 850 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 SLC15A2Q16348 729 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 SYDE2Q5VT97 1194 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 ACAD10Q6JQN1 1059 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 CEP128Q6ZU80 1094 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 SCUBE1Q8IWY4 988 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 RBM15BQ8NDT2 890 aaKnown RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 CCDC110Q8TBZ0 833 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 MPP4Q96JB8 637 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 PLEKHG4BQ96PX9 1271 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 THTPAQ9BU02 230 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 PHACTR1Q9C0D0 580 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 TMCO1Q9UM00 188 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 MTO1Q9Y2Z2 717 aaKnown RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 DNALI1O14645 258 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 DNAJC6O75061 913 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms