RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 TMEM270Q6UE05 265 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 FAXDC2Q96IV6 333 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 LBHD1Q9BQE6 289 aaPredicted RBP25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 MRPL9Q9BYD2 267 aaKnown RBP25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 ACP6Q9NPH0 428 aa25.73■■□□□ 1.71
ATPAF1-213ENST00000574428 NRDCO43847 1150 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 B3GAT3O94766 335 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 SERPING1P05155 500 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 MTF1Q14872 753 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 TDRD12Q587J7 1177 aaKnown RBP25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 TMTC1Q8IUR5 882 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 HASPINQ8TF76 798 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 NRDE2Q9H7Z3 1164 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 GDAP2Q9NXN4 497 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 OR1G1P47890 313 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 CDK17Q00537 523 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 HAUS4Q9H6D7 363 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 CYP3A43Q9HB55 503 aa25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 CXXC1Q9P0U4 656 aaPredicted RBP25.72■■□□□ 1.71
ATPAF1-213ENST00000574428 KIF4AO95239 1232 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 CALCAP01258 141 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 SOWAHAQ2M3V2 549 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 FMNL3Q8IVF7 1028 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 LRRC43Q8N309 656 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 RBBP8NLQ8NC74 664 aaPredicted RBP25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 NHEJ1Q9H9Q4 299 aaPredicted RBP25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 CNTN6Q9UQ52 1028 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 PRG3Q9Y2Y8 225 aaPredicted RBP25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 PTPRSQ13332 1948 aa25.71■■□□□ 1.71
ATPAF1-213ENST00000574428 ITGB1P05556 798 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 EIF4A3P38919 411 aaKnown RBP25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 PRKCIP41743 596 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 YWHAEP62258 255 aaKnown RBP25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 PTK2Q05397 1052 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 CD300LGQ6UXG3 332 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 RAD9BQ6WBX8 426 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 SLC47A2Q86VL8 602 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 RSPH1Q8WYR4 309 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 MRPL45Q9BRJ2 306 aaKnown RBP25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 HMGXB4Q9UGU5 601 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 PYCARDQ9ULZ3 195 aa25.7■■□□□ 1.7
ATPAF1-213ENST00000574428 I3L4J1 428 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 CCDC172P0C7W6 258 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 ZNF394Q53GI3 561 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 DCLRE1AQ6PJP8 1040 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 L1RE1Q9UN81 338 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 CYB561D2O14569 222 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 ARHGAP6O43182 974 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 ZNF132P52740 706 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 ORC1Q13415 861 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 TIGD5Q53EQ6 642 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 ZNF571Q7Z3V5 609 aaPredicted RBP25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 APPL2Q8NEU8 664 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 SENP8Q96LD8 212 aa25.69■■□□□ 1.7
ATPAF1-213ENST00000574428 HUS1O60921 280 aa25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 BRCC3P46736 316 aa25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 AARSP49588 968 aaKnown RBP eCLIP25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 INCA1Q0VD86 236 aa25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 DSTYKQ6XUX3 929 aa25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 SLC20A1Q8WUM9 679 aa25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 ZNF689Q96CS4 500 aaPredicted RBP25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 RC3H2Q9HBD1 1191 aaKnown RBP25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 BZW2Q9Y6E2 419 aaKnown RBP25.68■■□□□ 1.7
ATPAF1-213ENST00000574428 CILPO75339 1184 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 PBX3P40426 434 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 SLC11A1P49279 550 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 LIMS2Q7Z4I7 341 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 NOP9Q86U38 636 aaKnown RBP25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 PDCL2Q8N4E4 241 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 EPS8L1Q8TE68 723 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 WHAMMQ8TF30 809 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 KBTBD7Q8WVZ9 684 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 HERVK_113Q902F9 699 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 CCDC42Q96M95 316 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 TWNKQ96RR1 684 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 DEF6Q9H4E7 631 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 NRP1O14786 923 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 CYP11B1P15538 503 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 NDST1P52848 882 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 MAPK8IP2Q13387 824 aaPredicted RBP25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 ADGRF2Q8IZF7 708 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 TOP6BLQ8N6T0 577 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 NOCTQ9UK39 431 aaKnown RBP25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 BARX2Q9UMQ3 279 aaPredicted RBP25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 NR2E3Q9Y5X4 410 aa25.67■■□□□ 1.7
ATPAF1-213ENST00000574428 PDE6CP51160 858 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 TAF3Q5VWG9 929 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 WSCD1Q658N2 575 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 TOGARAM2Q6ZUX3 1019 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 KIAA1524Q8TCG1 905 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 YME1L1Q96TA2 773 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 ELOVL4Q9GZR5 314 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 CWH43Q9H720 699 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 SPTLC3Q9NUV7 552 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 NME7Q9Y5B8 376 aa25.66■■□□□ 1.7
ATPAF1-213ENST00000574428 SSU72P8A0A1W2PR75 194 aa25.65■■□□□ 1.7
ATPAF1-213ENST00000574428 TMEM189-UBE2V1I3L0A0 370 aa25.65■■□□□ 1.7
ATPAF1-213ENST00000574428 TACC1O75410 805 aa25.65■■□□□ 1.7
ATPAF1-213ENST00000574428 RAD23BP54727 409 aa25.65■■□□□ 1.7
ATPAF1-213ENST00000574428 BTG3Q14201 252 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms