RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 EXTL3O43909 919 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 ITGB3P05106 788 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 MYL4P12829 197 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 PAX3P23760 479 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CASP1P29466 404 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 AFMP43652 599 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CLCN5P51795 746 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CDR1P51861 262 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 WNT7BP56706 349 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 TCF15Q12870 199 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 DUSP4Q13115 394 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 SV2CQ496J9 727 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 RESP18Q5W5W9 173 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CWF19L1Q69YN2 538 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 TCEAL4Q96EI5 215 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 MAGEF1Q9HAY2 307 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 ASAH2Q9NR71 780 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 CEP72Q9P209 647 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 DSEQ9UL01 958 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
NPLOC4-213ENST00000573519 KRBA1A5PL33 1030 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 KPNA7A9QM74 516 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 H0Y858 1186 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 ZNF197O14709 1029 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 KRT19P08727 400 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 NPR3P17342 541 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 POLR2BP30876 1174 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 EPHB3P54753 998 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 GPC5P78333 572 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 GPR17Q13304 367 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 PLD1Q13393 1074 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 FAM26FQ5R3K3 315 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 THEM5Q8N1Q8 247 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 OR10T2Q8NGX3 314 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 LEO1Q8WVC0 666 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 ATOH1Q92858 354 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 FAM84AQ96KN4 292 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 C7orf25Q9BPX7 421 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 PDE11AQ9HCR9 933 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 FAM86C1Q9NVL1 165 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 GDE1Q9NZC3 331 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 AGAP1Q9UPQ3 857 aa13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 R3HCC1Q9Y3T6 440 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-213ENST00000573519 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 PI15O43692 258 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 SOAT2O75908 522 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 VNN2O95498 520 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 CYP11A1P05108 521 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 GJA1P17302 382 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 AOC1P19801 751 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 PNPLA4P41247 253 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 CCR2P41597 374 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 NUBP1P53384 320 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 BFSP1Q12934 665 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 PRSS36Q5K4E3 855 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 LMBRD2Q68DH5 695 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 CENPPQ6IPU0 288 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 CSGALNACT2Q8N6G5 542 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 ATAD1Q8NBU5 361 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 SPATA32Q96LK8 384 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 CRISPLD1Q9H336 500 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 SLC2A4RGQ9NR83 387 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 MYO10Q9HD67 2058 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 ANK1P16157 1881 aa13.7□□□□□ -0.22
NPLOC4-213ENST00000573519 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 EIF3DO15371 548 aaKnown RBP eCLIP13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 MRE11P49959 708 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 KRT85P78386 507 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 CUL4BQ13620 913 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 CNNM4Q6P4Q7 775 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 CBWD2Q8IUF1 395 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms