RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RNF4P78317 190 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 C17orf67Q0P5P2 114 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 SGCGQ13326 291 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 SMAD4Q13485 552 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 LASP1Q14847 261 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 C3orf36Q3SXR2 165 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 RABL6Q3YEC7 729 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 HSP90AA5PQ58FG0 334 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 TTC39AQ5SRH9 613 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 PRAMEF14Q5SWL7 426 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 NBPF12Q5TAG4 269 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 E4F1Q66K89 784 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ARL6IP4Q66PJ3 421 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ATG16L1Q676U5 607 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 TAF2Q6P1X5 1199 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CTR9Q6PD62 1173 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 SLC30A9Q6PML9 568 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 GLRX5Q86SX6 157 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ADCK1Q86TW2 530 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 C12orf40Q86WS4 652 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 HID1Q8IV36 788 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 SCN4BQ8IWT1 228 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 C17orf53Q8N3J3 647 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 FIBCD1Q8N539 461 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 TMEM57Q8N5G2 664 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 Q8NFD4 153 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC148Q8NFR7 591 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 NPLOC4Q8TAT6 608 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CYB5D2Q8WUJ1 264 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 GDF15Q99988 308 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 NTPCRQ9BSD7 190 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 WDR18Q9BV38 432 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ACE2Q9BYF1 805 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ANO3Q9BYT9 981 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 TWSG1Q9GZX9 223 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 WNT8AQ9H1J5 351 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 IPPKQ9H8X2 491 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 MLXIPQ9HAP2 919 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 TAB2Q9NYJ8 693 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CPNE7Q9UBL6 633 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 AFF4Q9UHB7 1163 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 ADGRE2Q9UHX3 823 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 FBXL21Q9UKT6 434 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CBLCQ9ULV8 474 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 SCAF8Q9UPN6 1271 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 PCDHB12Q9Y5F1 795 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 PIAS3Q9Y6X2 628 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 FAM169AQ9Y6X4 670 aa5.42□□□□□ -1.54
TOPBP1-210ENST00000572787 CTAGE9A4FU28 777 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CLCA1A8K7I4 914 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 H0YAE9 185 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 H3BUI4 141 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 PGRMC2O15173 223 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 DDHD2O94830 711 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 METTL18O95568 372 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 GHRHP01286 108 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 PRKCBP05771 671 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 THBDP07204 575 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CD9P21926 228 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 TPP2P29144 1249 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 HK3P52790 923 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 RARSP54136 660 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 MANFP55145 182 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 INHBEP58166 350 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 HERVK_113P62684 666 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ERVK-24P63145 666 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CCT2P78371 535 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 NKX6-1P78426 367 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 DSC2Q02487 901 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 SLC20A2Q08357 652 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ZBTB17Q13105 803 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 KCNAB2Q13303 367 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 GPR68Q15743 365 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 GARNL3Q5VVW2 1013 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 TMEM132EQ6IEE7 984 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 FDX2Q6P4F2 183 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 KLHDC10Q6PID8 442 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CYP20A1Q6UW02 462 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ATF7IPQ6VMQ6 1270 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 GBP6Q6ZN66 633 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CDC37L1Q7L3B6 337 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 MAML2Q8IZL2 1156 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ANKRD35Q8N283 1001 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 HDDC3Q8N4P3 179 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 PCSK9Q8NBP7 692 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 GMCL1P1Q8NEA9 526 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 OR6Y1Q8NGX8 325 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CEP76Q8TAP6 659 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 SPATA20Q8TB22 786 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 NEK9Q8TD19 979 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 COPS5Q92905 334 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 SLC35A4Q96G79 324 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CORO1BQ9BR76 489 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 NDST4Q9H3R1 872 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 TAF1DQ9H5J8 278 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC86Q9H6F5 360 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 CNNM1Q9NRU3 951 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 PRR13Q9NZ81 148 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms