RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 RUNX3Q13761 415 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 HNRNPDQ14103 355 aaKnown RBP19.83■□□□□ 0.77
CLK3-227ENST00000570296 GPR158Q5T848 1215 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 NCAPH2Q6IBW4 605 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 GAREM2Q75VX8 874 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 TPH2Q8IWU9 490 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 APPL2Q8NEU8 664 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 RPLP0P6Q8NHW5 317 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 EXOC4Q96A65 974 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 CHFRQ96EP1 664 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 CCDC43Q96MW1 224 aaKnown RBP19.83■□□□□ 0.77
CLK3-227ENST00000570296 FAM83CQ9BQN1 747 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 SLC26A6Q9BXS9 759 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 DNAJC25Q9H1X3 360 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 C2orf40Q9H1Z8 148 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 SLC38A7Q9NVC3 462 aa19.83■□□□□ 0.77
CLK3-227ENST00000570296 PLXNB3Q9ULL4 1909 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 MYO18BQ8IUG5 2567 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 SLITRK3O94933 977 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 ENGP17813 658 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 SOX4Q06945 474 aaPredicted RBP19.82■□□□□ 0.76
CLK3-227ENST00000570296 NTRK3Q16288 839 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 MAPK6Q16659 721 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 BLIDQ8IZY5 108 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 ATXN3LQ9H3M9 355 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 HPS4Q9NQG7 708 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 GKN1Q9NS71 199 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 INVSQ9Y283 1065 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 ASB3Q9Y575 518 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 NUB1Q9Y5A7 615 aa19.82■□□□□ 0.76
CLK3-227ENST00000570296 PTPRDP23468 1912 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 ACKR2O00590 384 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 GCFC2P16383 781 aaKnown RBP19.81■□□□□ 0.76
CLK3-227ENST00000570296 DPP6P42658 865 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 INF2Q27J81 1249 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 EEF1DP3Q658K8 133 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 HDDC3Q8N4P3 179 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 DAGLBQ8NCG7 672 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 TSTD1Q8NFU3 115 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 HAS1Q92839 578 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 SUSD3Q96L08 255 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 TASP1Q9H6P5 420 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 SHROOM3Q8TF72 1996 aa19.81■□□□□ 0.76
CLK3-227ENST00000570296 TNFRSF10BO14763 440 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 IFNAR1P17181 557 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 BCKDHBP21953 392 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 ALDH1A3P47895 512 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 RARRES1P49788 294 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 SLC23A3Q6PIS1 610 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 CCNI2Q6ZMN8 369 aaPredicted RBP19.8■□□□□ 0.76
CLK3-227ENST00000570296 APBB1IPQ7Z5R6 666 aaPredicted RBP19.8■□□□□ 0.76
CLK3-227ENST00000570296 P2RY13Q9BPV8 354 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 FBRSL1Q9HCM7 1045 aaKnown RBP19.8■□□□□ 0.76
CLK3-227ENST00000570296 ANO2Q9NQ90 1003 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 RAXQ9Y2V3 346 aa19.8■□□□□ 0.76
CLK3-227ENST00000570296 ZNF638Q14966 1978 aaKnown RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 SPTA1P02549 2419 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 OTOL1A6NHN0 477 aaPredicted RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 VNN2O95498 520 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 GABRR2P28476 465 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 RPL9P32969 192 aaKnown RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 GALK1P51570 392 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 FAM193AP78312 1265 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 XKR4Q5GH76 650 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 KRT25Q7Z3Z0 450 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 RASSF3Q86WH2 238 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 SYT12Q8IV01 421 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 FAM177A1Q8N128 213 aaPredicted RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 ADAMTS14Q8WXS8 1223 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 DDX12PQ92771 950 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 PSMG2Q969U7 264 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 CNOT6LQ96LI5 555 aaKnown RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 ESYT1Q9BSJ8 1104 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 OXCT2Q9BYC2 517 aaPredicted RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 TPSD1Q9BZJ3 242 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 CCDC113Q9H0I3 377 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 EBF3Q9H4W6 596 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 GPRC5CQ9NQ84 441 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 TOPORSQ9NS56 1045 aaPredicted RBP19.79■□□□□ 0.76
CLK3-227ENST00000570296 CITO14578 2027 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 HECTD1Q9ULT8 2610 aa19.79■□□□□ 0.76
CLK3-227ENST00000570296 ADAMTS9Q9P2N4 1935 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 TK2O00142 265 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 MARCH6O60337 910 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 USO1O60763 962 aaKnown RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 HMGB1P09429 215 aaKnown RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 ALKAL1Q6UXT8 129 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 DNAJB7Q7Z6W7 309 aaPredicted RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 MCPH1Q8NEM0 835 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 CCDC26Q8TAB7 109 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 UBL7Q96S82 380 aaPredicted RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 HSD17B14Q9BPX1 270 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 EIF2AK1Q9BQI3 630 aaKnown RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 POLR3CQ9BUI4 534 aaPredicted RBP19.78■□□□□ 0.76
CLK3-227ENST00000570296 ZMYM5Q9UJ78 669 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 TBX20Q9UMR3 447 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 PCDHB8Q9UN66 801 aa19.78■□□□□ 0.76
CLK3-227ENST00000570296 DENND4CQ5VZ89 1909 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms