RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ATP5JP18859 108 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 FUT4P22083 530 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 MCCP23508 829 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 AVPR2P30518 371 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 ZXDAP98168 799 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 SEPT7Q16181 437 aaKnown RBP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 SLC23A3Q6PIS1 610 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 RPAINQ86UA6 219 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 DDX42Q86XP3 938 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 MYOCDQ8IZQ8 938 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 C7orf31Q8N865 590 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 ANKS4BQ8N8V4 417 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 TOP1MTQ969P6 601 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 STRBPQ96SI9 672 aaKnown RBP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 JAM3Q9BX67 310 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 PUS7LQ9H0K6 701 aaKnown RBP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 BOLA2Q9H3K6 86 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 MARCH2Q9P0N8 246 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 PNMA2Q9UL42 364 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 TNNQ9UQP3 1299 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 EXOC6BQ9Y2D4 811 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 ZNF318Q5VUA4 2279 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
UBFD1-209ENST00000569919 EMSYQ7Z589 1322 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 SCN10AQ9Y5Y9 1956 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 SIP14410 1827 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 COL4A4P53420 1690 aaPredicted RBP6.94□□□□□ -1.3
UBFD1-209ENST00000569919 PTPDC1A2A3K4 754 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 C5orf67F2Z3F1 127 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 H7BY64 318 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 M0R2C6 588 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 GH1P01241 217 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 GNAT2P19087 354 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 FPR2P25090 351 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 DNM2P50570 870 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 SIGLEC14Q08ET2 396 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 STRN3Q13033 797 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 ADAM15Q13444 863 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 SMAD4Q13485 552 aaKnown RBP6.94□□□□□ -1.3
UBFD1-209ENST00000569919 DGKDQ16760 1214 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 ZNF618Q5T7W0 954 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 SPPL2CQ8IUH8 684 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 TEX2Q8IWB9 1127 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 DBF4BQ8NFT6 615 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 FBXW5Q969U6 566 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 CTAGE1Q96RT6 745 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 YME1L1Q96TA2 773 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 KCNJ15Q99712 375 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 KATNAL1Q9BW62 490 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 CELF4Q9BZC1 486 aaKnown RBP6.94□□□□□ -1.3
UBFD1-209ENST00000569919 MAF1Q9H063 256 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 IMPACTQ9P2X3 320 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 HDAC6Q9UBN7 1215 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 CD207Q9UJ71 328 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
UBFD1-209ENST00000569919 PTPRSQ13332 1948 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 A0A1W2PQ27 194 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 A0A1W2PQ64 194 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 A0A1W2PQC6 194 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 A0A1W2PQD8 194 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CCDC66A2RUB6 948 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 NOTOA8MTQ0 251 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 RSPH10B2B2RC85 870 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 LOC730098B7Z3J9 87 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 GSTA4O15217 222 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 PRDM1O75626 825 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 EYA4O95677 639 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 FUCA1P04066 466 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
UBFD1-209ENST00000569919 RSPH10BP0C881 870 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 PYGMP11217 842 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CDK11BP21127 795 aaKnown RBP6.93□□□□□ -1.3
UBFD1-209ENST00000569919 EDNRBP24530 442 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CALML3P27482 149 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 BMPR1AP36894 532 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 ID4P47928 161 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
UBFD1-209ENST00000569919 SNAP25P60880 206 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 TFAP4Q01664 338 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CHRNEQ04844 493 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 HYAL1Q12794 435 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 DHCR24Q15392 516 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 TRIM71Q2Q1W2 868 aaKnown RBP6.93□□□□□ -1.3
UBFD1-209ENST00000569919 CEP85Q6P2H3 762 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 RNF207Q6ZRF8 634 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 OXR1Q8N573 874 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 PLEKHO2Q8TD55 490 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 AFG1LQ8WV93 481 aa6.93□□□□□ -1.3
UBFD1-209ENST00000569919 KAT2BQ92831 832 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms