RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 KLK14Q9P0G3 267 aa6.9□□□□□ -1.3
BBS4-218ENST00000569440 MAFFQ9ULX9 164 aa6.9□□□□□ -1.3
BBS4-218ENST00000569440 TBX20Q9UMR3 447 aa6.9□□□□□ -1.3
BBS4-218ENST00000569440 ATXN2Q99700 1313 aaKnown RBP6.9□□□□□ -1.3
BBS4-218ENST00000569440 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
BBS4-218ENST00000569440 hCG_1642624A0A1W2PR95 340 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 A0A1W2PRU2 124 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 FAM149AA5PLN7 773 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 PRAMEF12O95522 483 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 SYPP08247 313 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 HLA-EP13747 358 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 TKTP29401 623 aaKnown RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 MCM2P49736 904 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 GNAQP50148 359 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 AMPD2Q01433 879 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 RHDQ02161 417 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 TLE3Q04726 772 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 LAMTOR4Q0VGL1 99 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 MAP7D1Q3KQU3 841 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 TPGS2Q68CL5 300 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 NAIF1Q69YI7 327 aaPredicted RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 ANO7Q6IWH7 933 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 CTCFLQ8NI51 663 aaPredicted RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 RLN3Q8WXF3 142 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 JPH2Q9BR39 696 aaPredicted RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 DSCC1Q9BVC3 393 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 THG1LQ9NWX6 298 aaKnown RBP6.89□□□□□ -1.31
BBS4-218ENST00000569440 TCEAL9Q9UHQ7 104 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 ACACAQ13085 2346 aa6.89□□□□□ -1.31
BBS4-218ENST00000569440 PCNX2A6NKB5 2137 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 WDR81Q562E7 1941 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 ERICH2A1L162 156 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 DDAH1O94760 285 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 ERLIN2O94905 339 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 THP07101 528 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 ARF4P18085 180 aaPredicted RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 ADSSP30520 456 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 SFNP31947 248 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 NCBP1Q09161 790 aaKnown RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 SERINC3Q13530 473 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 LY6DQ14210 128 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 CRY1Q16526 586 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 ANO5Q75V66 913 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 RNF149Q8NC42 400 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 SNIP1Q8TAD8 396 aaKnown RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 SPIRE2Q8WWL2 714 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 LENG9Q96B70 501 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 TBC1D32Q96NH3 1257 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 POLR3CQ9BUI4 534 aaPredicted RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 TRIM6Q9C030 488 aaPredicted RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 CXCL16Q9H2A7 254 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
BBS4-218ENST00000569440 SRPK3Q9UPE1 567 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 DOCK6Q96HP0 2047 aa6.88□□□□□ -1.31
BBS4-218ENST00000569440 ASCC3Q8N3C0 2202 aaKnown RBP6.87□□□□□ -1.31
BBS4-218ENST00000569440 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 A0A1B0GUA9 196 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 A0A1W2PQD8 194 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 PLK4O00444 970 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 TERTO14746 1132 aaKnown RBP6.87□□□□□ -1.31
BBS4-218ENST00000569440 ASAP2O43150 1006 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 TRAPPC3O43617 180 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 B3GAT3O94766 335 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 PRKCBP05771 671 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
BBS4-218ENST00000569440 SDSP20132 328 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 U2AF2P26368 475 aaKnown RBP eCLIP6.87□□□□□ -1.31
BBS4-218ENST00000569440 CIITAP33076 1130 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 GJA4P35212 333 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 JAK3P52333 1124 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 RIPPLY3P57055 190 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 PTENP60484 403 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 CXADRP78310 365 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 BYSLQ13895 437 aaKnown RBP6.87□□□□□ -1.31
BBS4-218ENST00000569440 PRR16Q569H4 304 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 LMBRD2Q68DH5 695 aaPredicted RBP6.87□□□□□ -1.31
BBS4-218ENST00000569440 TRIM68Q6AZZ1 485 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 SLC27A1Q6PCB7 646 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 B3GNT9Q6UX72 402 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 GAREM2Q75VX8 874 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
BBS4-218ENST00000569440 BEST2Q8NFU1 509 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms