RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CLTAP09496 248 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ZSCAN5DPP0CG00 497 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ATF2P15336 505 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 OAZ1P54368 228 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 MAMLD1Q13495 774 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 TRPC3Q13507 836 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ENOSF1Q7L5Y1 443 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ABRAQ8N0Z2 381 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ZNF606Q8WXB4 792 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 CLMNQ96JQ2 1002 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 TXLNGYQ9BZA5 131 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 KIAA1586Q9HCI6 787 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 DONSONQ9NYP3 566 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ANAPC5Q9UJX4 755 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 RBBP6Q7Z6E9 1792 aaKnown RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 F8VP50 259 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 H0YCG3 227 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 PIK3R2O00459 728 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 B4GALT5O43286 388 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 FARP2O94887 1054 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ARIH2O95376 493 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ACO1P21399 889 aaKnown RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 IBSPP21815 317 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 CDR1P51861 262 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 BPIFB4P59827 614 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 GJC2Q5T442 439 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ICE2Q659A1 982 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 C15orf39Q6ZRI6 1047 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 MON1BQ7L1V2 547 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 OSBPL8Q9BZF1 889 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 INTS9Q9NV88 658 aaKnown RBP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00558-201ENST00000569422 GPRC5DQ9NZD1 345 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 ADAMTS5Q9UNA0 930 aa9.29□□□□□ -0.92
LINC00558-201ENST00000569422 A0A0B4J269 797 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 FSCN2O14926 492 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 PROSCO94903 275 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ETS1P14921 441 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ARL2P36404 184 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 NOMO3P69849 1222 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SMTNL2Q2TAL5 461 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 TXNRD3NBQ6F5E7 133 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SLFN12LQ6IEE8 588 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 MICALCLQ6ZW33 695 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 FBXO16Q8IX29 292 aaPredicted RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GDAP1Q8TB36 358 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 TMEM174Q8WUU8 243 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 KAT2BQ92831 832 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ART4Q93070 314 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SEC16BQ96JE7 1060 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CGRRF1Q99675 332 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 DCLK3Q9C098 648 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SAE1Q9UBE0 346 aaPredicted RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CSADQ9Y600 493 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CCDC189A1A4V9 331 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ADCY3O60266 1144 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GAS8O95995 478 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 RARGP13631 454 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 FNTAP49354 379 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CLCN3P51790 818 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 DRG2P55039 364 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CDH8P55286 799 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CENPCQ03188 943 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SLMAPQ14BN4 828 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 KCNT1Q5JUK3 1230 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CCDC121Q6ZUS5 278 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 RHOT1Q8IXI2 618 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GLIS1Q8NBF1 620 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 XPO6Q96QU8 1125 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SPATC1LQ9H0A9 340 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 LRRC19Q9H756 370 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ZWILCHQ9H900 591 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 TJP2Q9UDY2 1190 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CENPFP49454 3210 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 ZC3H11AO75152 810 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 PIAS1O75925 651 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 LDHAP00338 332 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 KRT1P04264 644 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CYP1A1P04798 512 aaPredicted RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 TMEM191BP0C7N4 346 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 RTP1P59025 263 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 LAMTOR4Q0VGL1 99 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 C6orf118Q5T5N4 469 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GPAT2Q6NUI2 795 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 TMEM192Q8IY95 271 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 PPP1R13LQ8WUF5 828 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 SEPT1Q8WYJ6 367 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 C12orf42Q96LP6 360 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms