RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SOAT2O75908 522 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 SEC24AO95486 1093 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 TNNC2P02585 160 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 NR3C1P04150 777 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ASGR2P07307 311 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ODC1P11926 461 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 GBP2P32456 591 aaPredicted RBP9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 MTHFRP42898 656 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 DLG4P78352 724 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 CREMQ03060 361 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ITIH3Q06033 890 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 CYP24A1Q07973 514 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ADCY1Q08828 1119 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 BIRC3Q13489 604 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 KLHL10Q6JEL2 608 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 LILRA6Q6PI73 481 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 RNF19BQ6ZMZ0 732 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 GPR149Q86SP6 731 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 METTL23Q86XA0 190 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 RNF135Q8IUD6 432 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 SUSD6Q92537 303 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 CCDC34Q96HJ3 373 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 PHF7Q9BWX1 381 aaPredicted RBP9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 SMOC2Q9H3U7 446 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 INTS13Q9NVM9 706 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 DERAQ9Y315 318 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 SNX9Q9Y5X1 595 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 UBE4BO95155 1302 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 ANO9A1A5B4 782 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 KPNA7A9QM74 516 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 M0QZQ0 153 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 CALUO43852 315 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 RHOBTB3O94955 611 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 SMC2O95347 1197 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 CST3P01034 146 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 LRG1P02750 347 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 NR2F2P24468 414 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 PRCPP42785 496 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 RBP5P82980 135 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 RAB33AQ14088 237 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 CCDC142Q17RM4 750 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 BMT2Q1RMZ1 405 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 SV2CQ496J9 727 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 SLC39A12Q504Y0 691 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 PDXDC1Q6P996 788 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 ELMSAN1Q6PJG2 1045 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 CCDC149Q6ZUS6 474 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 GPIHBP1Q8IV16 184 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 STKLD1Q8NE28 680 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM200AQ8TCP9 573 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 PLEKHO2Q8TD55 490 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 ING5Q8WYH8 240 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 ZNF707Q96C28 371 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 MMS19Q96T76 1030 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 KCTD10Q9H3F6 313 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 PLEKHA4Q9H4M7 779 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 FBXW11Q9UKB1 542 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 MAN1B1Q9UKM7 699 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 BACE2Q9Y5Z0 518 aa9.72□□□□□ -0.85
GTF3C1-210ENST00000569394 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 HUS1O60921 280 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 MYL1P05976 194 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TRIM49P0CI25 452 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TRIM49CP0CI26 452 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 GJA1P17302 382 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 RAP1GAPP47736 663 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 STX17P56962 302 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TWF1Q12792 350 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 DUSP4Q13115 394 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 ADAM9Q13443 819 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TRPC3Q13507 836 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 MRPL58Q14197 206 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 KCNB1Q14721 858 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 PSMD6Q15008 389 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 SURF1Q15526 300 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 DUOXA2Q1HG44 320 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 SCARA5Q6ZMJ2 495 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TRAPPC11Q7Z392 1133 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 OSTM1Q86WC4 334 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 CREBRFQ8IUR6 639 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 WDR49Q8IV35 697 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 THEM5Q8N1Q8 247 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TTC9BQ8N6N2 239 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 TDRD5Q8NAT2 981 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 ATAD1Q8NBU5 361 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 ZNF461Q8TAF7 563 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 GPR152Q8TDT2 470 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 RSAD2Q8WXG1 361 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 BORCS6Q96GS4 357 aa9.71□□□□□ -0.86
GTF3C1-210ENST00000569394 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms