RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	AOPEP	Q8N6M6	819 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	ATL2	Q8NHH9	583 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	HASPIN	Q8TF76	798 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	DPF2	Q92785	391 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	FBXL20	Q96IG2	436 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	IL17RB	Q9NRM6	502 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	MCM8	Q9UJA3	840 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	LRP12	Q9Y561	859 aa		4.57	□□□□□ -1.68
UBR1-209	ENST00000569243	CCDC195	A0A1B0GUA6	201 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	WDR27	A2RRH5	827 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	SUN1	O94901	812 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	MAPK10	P53779	464 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	PDSS2	Q86YH6	399 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	COG1	Q8WTW3	980 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	MRGPRX4	Q96LA9	322 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	SLC2A13	Q96QE2	648 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	PACSIN1	Q9BY11	444 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	MAN1C1	Q9NR34	630 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	SIDT1	Q9NXL6	827 aa	Known RBP	4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	IPP	Q9Y573	584 aa		4.56	□□□□□ -1.68
UBR1-209	ENST00000569243	NDUFS2	O75306	463 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	ITPKB	P27987	946 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	C11orf87	Q6NUJ2	197 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	PEG10	Q86TG7	708 aa	Known RBP	4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	ADGRG5	Q8IZF4	528 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	CFAP52	Q8N1V2	620 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	SLC30A5	Q8TAD4	765 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	LPIN2	Q92539	896 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	SNX19	Q92543	992 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	TMEM125	Q96AQ2	219 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	TMX3	Q96JJ7	454 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	ZNF48	Q96MX3	618 aa	Predicted RBP	4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	KLHL32	Q96NJ5	620 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	TLR10	Q9BXR5	811 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	KLC4	Q9NSK0	619 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	RLIM	Q9NVW2	624 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	SLC5A4	Q9NY91	659 aa		4.55	□□□□□ -1.68
UBR1-209	ENST00000569243	KLHL33	A6NCF5	533 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243		H3BNC9	293 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	SOAT2	O75908	522 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	NTN1	O95631	604 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	PRKCG	P05129	697 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CYP2C19	P33261	490 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	KRTAP27-1	Q3LI81	207 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CBARP	Q8N350	705 aa	Predicted RBP	4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CNTD1	Q8N815	330 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	POC1B	Q8TC44	478 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	JADE3	Q92613	823 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	DPF1	Q92782	380 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	SCAMP4	Q969E2	229 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	OSBPL9	Q96SU4	736 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	ALG8	Q9BVK2	526 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CPNE5	Q9HCH3	593 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	VSX1	Q9NZR4	365 aa	Predicted RBP	4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	FLRT1	Q9NZU1	646 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	TUBD1	Q9UJT1	453 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CDYL	Q9Y232	598 aa		4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	CFAP20	Q9Y6A4	193 aa	Known RBP	4.54	□□□□□ -1.68
UBR1-209	ENST00000569243	MANSC4	A6NHS7	340 aa	Predicted RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	ADM5	C9JUS6	153 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	PRR23D1	E9PI22	279 aa	Predicted RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	CHEK2	O96017	543 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	SBK3	P0C264	359 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	CCT4	P50991	539 aa	Known RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	TLE1	Q04724	770 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	TXNRD1	Q16881	649 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	CD300E	Q496F6	205 aa	Predicted RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	FCRLB	Q6BAA4	426 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	PGM2L1	Q6PCE3	622 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	PPM1N	Q8N819	430 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	TFAP2B	Q92481	460 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	FAXDC2	Q96IV6	333 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	NELL2	Q99435	816 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	GNL3L	Q9NVN8	582 aa	Known RBP	4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	MKS1	Q9NXB0	559 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	PCDHA13	Q9Y5I0	950 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	WNT6	Q9Y6F9	365 aa		4.53	□□□□□ -1.68
UBR1-209	ENST00000569243	AOX1	Q06278	1338 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	ZNF521	Q96K83	1311 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	HTRA2	O43464	458 aa	Predicted RBP	4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	FTH1P19	P0C7X4	201 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	KRT10	P13645	584 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	FOXG1	P55316	489 aa	Predicted RBP	4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	CLUL1	Q15846	466 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	FLYWCH1	Q4VC44	716 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	MTX3	Q5HYI7	312 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	EGFLAM	Q63HQ2	1017 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	GADL1	Q6ZQY3	521 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	TTC7B	Q86TV6	843 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	B3GALNT2	Q8NCR0	500 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	TOR1AIP2	Q8NFQ8	470 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	SEMA6D	Q8NFY4	1073 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	MYCBPAP	Q8TBZ2	947 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	NSUN6	Q8TEA1	469 aa	Known RBP	4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	COA7	Q96BR5	231 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	PBK	Q96KB5	322 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	DMRTA2	Q96SC8	542 aa		4.52	□□□□□ -1.69
UBR1-209	ENST00000569243	SMO	Q99835	787 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms