RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 SAP30BPQ9UHR5 308 aaKnown RBP4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 FZD1Q9UP38 647 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 RIPOR2Q9Y4F9 1068 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 SPEF1Q9Y4P9 236 aa4.33□□□□□ -1.72
HMGB1P6-201ENST00000569046 XRN1Q8IZH2 1706 aaKnown RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 TRPM2O94759 1503 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 DAPK1P53355 1430 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 ERBINQ96RT1 1412 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 SETD5Q9C0A6 1442 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 CENPVL1A0A0U1RR11 272 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 MAP4K4O95819 1239 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 POMCP01189 267 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 ITGB1P05556 798 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 SBK3P0C264 359 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 CCND1P24385 295 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 PTGS2P35354 604 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 RECQLP46063 649 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 FXR1P51114 621 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 ZNF280AP59817 542 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 CTXN1P60606 82 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 CDC42EP1Q00587 391 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 FHL2Q14192 279 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 BEAN1Q3B7T3 259 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 UAP1L1Q3KQV9 507 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 MIGA2Q7L4E1 593 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 OR56A1Q8NGH5 318 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 MRGPRX4Q96LA9 322 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 ADAM2Q99965 735 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 TDP1Q9NUW8 608 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 KLHL11Q9NVR0 708 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 FAM30AQ9NZY2 134 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 SRRDQ9UH36 339 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 G3BP2Q9UN86 482 aaKnown RBP4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 MAP3K2Q9Y2U5 619 aa4.32□□□□□ -1.72
HMGB1P6-201ENST00000569046 GLI3P10071 1580 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 LMTK2Q8IWU2 1503 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 LOC102724159A0A0B4J2E5 919 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 TMEM200CA6NKL6 621 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 DIRC3C9JPN6 131 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 RNASET2O00584 256 aaKnown RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 KIAA0391O15091 583 aaKnown RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 TEX33O43247 280 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 NDUFA10O95299 355 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 ADH4P08319 380 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 PDGFRBP09619 1106 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 NEK2P51955 445 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 DSC2Q02487 901 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 PWP2Q15269 919 aaKnown RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 TSHZ3Q63HK5 1081 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 USP51Q70EK9 711 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 RSPH3Q86UC2 560 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 VRK3Q8IV63 474 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 RHOT2Q8IXI1 618 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 CPA6Q8N4T0 437 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 CHMP4CQ96CF2 233 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 MYEOVQ96EZ4 313 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 ZSWIM1Q9BR11 485 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 GSTO2Q9H4Y5 243 aa4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 TRPC5Q9UL62 973 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 LUC7L2Q9Y383 392 aaKnown RBP4.31□□□□□ -1.72
HMGB1P6-201ENST00000569046 METP08581 1390 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 AATKQ6ZMQ8 1374 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 PLCH1Q4KWH8 1693 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 CAMTA1Q9Y6Y1 1673 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 GAGE12BA1L429 117 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 GAGE12HA6NDE8 117 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 TPD52L2O43399 206 aaKnown RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 SGTAO43765 313 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 ALDH1L1O75891 902 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 SNUPNO95149 360 aaKnown RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 ABHD16AO95870 558 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 CFIP05156 583 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 LAG3P18627 525 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 PDCP20941 246 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 GCSHP23434 173 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 NOMO3P69849 1222 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 TLE1Q04724 770 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 FLYWCH1Q4VC44 716 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 TIGD2Q4W5G0 525 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 HSP90AB2PQ58FF8 381 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 B3GNTL1Q67FW5 361 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 ZBTB46Q86UZ6 589 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 LDLRAD3Q86YD5 345 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 CPEB3Q8NE35 698 aaKnown RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 PROKR1Q8TCW9 393 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 NSUN6Q8TEA1 469 aaKnown RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 HOOK2Q96ED9 719 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 MRIQ9BWK5 157 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 ANKFY1Q9P2R3 1169 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms