RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SPATA1Q5VX52 437 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 ARMCX5Q6P1M9 558 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 MAP4K3Q8IVH8 894 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 SUMF1Q8NBK3 374 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 LARP4BQ92615 738 aaKnown RBP14.82□□□□□ -0.04
CNOT1-215ENST00000569020 TRPV4Q9HBA0 871 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 CPSF3Q9UKF6 684 aaKnown RBP14.82□□□□□ -0.04
CNOT1-215ENST00000569020 NDRG2Q9UN36 371 aaKnown RBP14.82□□□□□ -0.04
CNOT1-215ENST00000569020 SCN1AP35498 2009 aa14.82□□□□□ -0.04
CNOT1-215ENST00000569020 RIF1Q5UIP0 2472 aaKnown RBP14.81□□□□□ -0.04
CNOT1-215ENST00000569020 A0A1W2PRU2 124 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 NRG2O14511 850 aaPredicted RBP14.81□□□□□ -0.04
CNOT1-215ENST00000569020 VIPR2P41587 438 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 LILRA4P59901 499 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 GTF2BQ00403 316 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 FZD5Q13467 585 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 PPP2R5DQ14738 602 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 YAF2Q8IY57 180 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 KRI1Q8N9T8 703 aaKnown RBP14.81□□□□□ -0.04
CNOT1-215ENST00000569020 SHKBP1Q8TBC3 707 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 LRRC15Q8TF66 581 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 FAM3CQ92520 227 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 SENP8Q96LD8 212 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 ZSCAN32Q9NX65 697 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 NCDNQ9UBB6 729 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 SLC27A5Q9Y2P5 690 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 DERAQ9Y315 318 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 PIAS3Q9Y6X2 628 aa14.81□□□□□ -0.04
CNOT1-215ENST00000569020 VPS13AQ96RL7 3174 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 MTMR11A4FU01 709 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 SHISA7A6NL88 538 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 HEPACAM2A8MVW5 462 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 PPEF2O14830 753 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 VNN2O95498 520 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 FGF19O95750 216 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 NMT1P30419 496 aaKnown RBP14.8□□□□□ -0.04
CNOT1-215ENST00000569020 DDIT3P35638 169 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ACOT2P49753 483 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 GRIN1Q05586 938 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 TMEM132DQ14C87 1099 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 C9orf57Q5W0N0 161 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ADALQ6DHV7 355 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 SLFN12LQ6IEE8 588 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 CENPPQ6IPU0 288 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 SLC39A4Q6P5W5 647 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ITIH5Q86UX2 942 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 TMC8Q8IU68 726 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 DCLK2Q8N568 766 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ZBTB44Q8NCP5 570 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 CSGALNACT1Q8TDX6 532 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 SECISBP2LQ93073 1101 aaKnown RBP14.8□□□□□ -0.04
CNOT1-215ENST00000569020 FIZ1Q96SL8 496 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 IER2Q9BTL4 223 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 LRRC3Q9BY71 257 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 FAM126AQ9BYI3 521 aaPredicted RBP14.8□□□□□ -0.04
CNOT1-215ENST00000569020 CCSER1Q9C0I3 900 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 CRISPLD1Q9H336 500 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ASB7Q9H672 318 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 PRMT8Q9NR22 394 aaPredicted RBP14.8□□□□□ -0.04
CNOT1-215ENST00000569020 HSFX1Q9UBD0 423 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 ASB3Q9Y575 518 aa14.8□□□□□ -0.04
CNOT1-215ENST00000569020 PIRO00625 290 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 DPYSL4O14531 572 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 NFICP08651 508 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 MTAPQ13126 283 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ZNF638Q14966 1978 aaKnown RBP14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ZC2HC1CQ53FD0 456 aaPredicted RBP14.79□□□□□ -0.04
CNOT1-215ENST00000569020 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 C1orf228Q6PIY5 440 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 TSSK4Q6SA08 328 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ATAD1Q8NBU5 361 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 NELL1Q92832 810 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 PSMG2Q969U7 264 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 RMDN1Q96DB5 314 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 CHRDQ9H2X0 955 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ST6GALNAC4Q9H4F1 302 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 CCDC39Q9UFE4 941 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 AGO2Q9UKV8 859 aaKnown RBP14.79□□□□□ -0.04
CNOT1-215ENST00000569020 DSEQ9UL01 958 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 KIF26AQ9ULI4 1882 aaPredicted RBP14.79□□□□□ -0.04
CNOT1-215ENST00000569020 C2CD2Q9Y426 696 aa14.79□□□□□ -0.04
CNOT1-215ENST00000569020 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 ANKRD63C9JTQ0 380 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 CHADO15335 359 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 LILRB5O75023 590 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 CYP11A1P05108 521 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 CCNE1P24864 410 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 TUFMP49411 452 aaKnown RBP14.78□□□□□ -0.04
CNOT1-215ENST00000569020 TAF6P49848 677 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 NRLP54845 237 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 MLLT6P55198 1093 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-215ENST00000569020 ARHGAP15Q53QZ3 475 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 DYMQ7RTS9 669 aa14.78□□□□□ -0.04
CNOT1-215ENST00000569020 DNAJB7Q7Z6W7 309 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-215ENST00000569020 METTL23Q86XA0 190 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms