RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 ALCAMQ13740 583 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 MYBPC2Q14324 1141 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 LEMD2Q8NC56 503 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 PJA1Q8NG27 643 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 SAAL1Q96ER3 474 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 SHDQ96IW2 340 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 ZNF396Q96N95 335 aaPredicted RBP20.12■□□□□ 0.81
CPNE7-209ENST00000568977 TMEM209Q96SK2 561 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 FOXQ1Q9C009 403 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 PANK4Q9NVE7 773 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 PCDHB13Q9Y5F0 798 aa20.12■□□□□ 0.81
CPNE7-209ENST00000568977 PPP6R2O75170 966 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 CYP11A1P05108 521 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 DCNP07585 359 aaKnown RBP20.11■□□□□ 0.81
CPNE7-209ENST00000568977 MYL4P12829 197 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 TAF6P49848 677 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 WNT7BP56706 349 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 DUSP4Q13115 394 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 TANGO2Q6ICL3 276 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 NT5DC4Q86YG4 428 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 HSCBQ8IWL3 235 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 BRSK2Q8IWQ3 736 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 SYCP3Q8IZU3 236 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 TTC9BQ8N6N2 239 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 OR10T2Q8NGX3 314 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 ELSPBP1Q96BH3 223 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 FAM213AQ9BRX8 229 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 PLA2G2FQ9BZM2 168 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 TNMDQ9H2S6 317 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 TFIP11Q9UBB9 837 aaKnown RBP20.11■□□□□ 0.81
CPNE7-209ENST00000568977 SIT1Q9Y3P8 196 aa20.11■□□□□ 0.81
CPNE7-209ENST00000568977 MOSPD3O75425 235 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 YEATS4O95619 227 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 GJA1P17302 382 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 PRKCQQ04759 706 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 E2F4Q16254 413 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 SLC44A4Q53GD3 710 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 FAM78AQ5JUQ0 283 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 FOXD4L5Q5VV16 416 aaPredicted RBP20.1■□□□□ 0.81
CPNE7-209ENST00000568977 CENPPQ6IPU0 288 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 ARMCX5Q6P1M9 558 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 CCDC65Q8IXS2 484 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 ATAD1Q8NBU5 361 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 ZSWIM2Q8NEG5 633 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 FOXD4L4Q8WXT5 416 aaPredicted RBP20.1■□□□□ 0.81
CPNE7-209ENST00000568977 ASB16Q96NS5 453 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 PYM1Q9BRP8 204 aaKnown RBP20.1■□□□□ 0.81
CPNE7-209ENST00000568977 DDX23Q9BUQ8 820 aaKnown RBP20.1■□□□□ 0.81
CPNE7-209ENST00000568977 DNAJC25Q9H1X3 360 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 DLGAP2Q9P1A6 1054 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 DSEQ9UL01 958 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 COL4A2P08572 1712 aa20.1■□□□□ 0.81
CPNE7-209ENST00000568977 KANSL1LA0AUZ9 987 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 GARTP22102 1010 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 EPHB3P54753 998 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 SV2CQ496J9 727 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 FRMD5Q7Z6J6 570 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 TMC8Q8IU68 726 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 SHKBP1Q8TBC3 707 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 ZNF560Q96MR9 790 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 CBWD1Q9BRT8 395 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 ZFP14Q9HCL3 533 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 RBAKQ9NYW8 714 aaPredicted RBP20.09■□□□□ 0.81
CPNE7-209ENST00000568977 PATJQ8NI35 1801 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 USP34Q70CQ2 3546 aa20.09■□□□□ 0.81
CPNE7-209ENST00000568977 CYB561D2O14569 222 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 LRRN2O75325 713 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 PRPF6O94906 941 aaKnown RBP20.08■□□□□ 0.81
CPNE7-209ENST00000568977 LDHAP00338 332 aaKnown RBP20.08■□□□□ 0.81
CPNE7-209ENST00000568977 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.81
CPNE7-209ENST00000568977 ALDH1A3P47895 512 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 TFAMQ00059 246 aaKnown RBP20.08■□□□□ 0.81
CPNE7-209ENST00000568977 GRM2Q14416 872 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 TEAD2Q15562 447 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 ASCL5Q7RTU5 278 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 METTL23Q86XA0 190 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 SMARCD2Q92925 531 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 DHX58Q96C10 678 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 ZSWIM3Q96MP5 696 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 LRRC3Q9BY71 257 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 TRIM9Q9C026 710 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 ZCWPW1Q9H0M4 648 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 CUEDC2Q9H467 287 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 TMEM206Q9H813 350 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 KBTBD4Q9NVX7 518 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 SLC27A5Q9Y2P5 690 aa20.08■□□□□ 0.81
CPNE7-209ENST00000568977 MYO15AQ9UKN7 3530 aa20.08■□□□□ 0.8
CPNE7-209ENST00000568977 TICRRQ7Z2Z1 1910 aa20.08■□□□□ 0.8
CPNE7-209ENST00000568977 ZFHX2Q9C0A1 2572 aaPredicted RBP20.07■□□□□ 0.8
CPNE7-209ENST00000568977 GOLGA8IPA6NC78 632 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 PRR23AA6NEV1 266 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 GOLGA8JA6NMD2 632 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 TULP1O00294 542 aaPredicted RBP20.07■□□□□ 0.8
CPNE7-209ENST00000568977 EXTL3O43909 919 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 CUTAO60888 179 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 SOAT2O75908 522 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 GLULP15104 373 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 POLR2BP30876 1174 aaKnown RBP20.07■□□□□ 0.8
CPNE7-209ENST00000568977 UBXN2BQ14CS0 331 aa20.07■□□□□ 0.8
CPNE7-209ENST00000568977 SLC39A12Q504Y0 691 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms