RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NUF2Q9BZD4 464 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 PCMTD2Q9NV79 361 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 MON2Q7Z3U7 1717 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 A6NJR5 290 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 EML1O00423 815 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 NEK3P51956 506 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 MROH9Q5TGP6 573 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ANO5Q75V66 913 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ALYREFQ86V81 257 aaKnown RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 FBXL13Q8NEE6 735 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 GPRC5CQ9NQ84 441 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 WDR35Q9P2L0 1181 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 STXBP5LQ9Y2K9 1186 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ASTN1O14525 1302 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ESYT2A0FGR8 921 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 AIM2O14862 343 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 HNRNPCL1O60812 293 aaKnown RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 HOXA7P31268 230 aaPredicted RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 HIRAP54198 1017 aaPredicted RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 PPP3CAQ08209 521 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 DMP1Q13316 513 aaPredicted RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 SLC45A4Q5BKX6 768 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 SPDYCQ5MJ68 293 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 SLC17A7Q9P2U7 560 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 TRIM49D1C9J1S8 452 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 F5H6K3 240 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 IPO5O00410 1097 aaKnown RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 KCNQ2O43526 872 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 NPTXRO95502 500 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 LYNP07948 512 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 PRAMEP78395 509 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 SLC25A3Q00325 362 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 BMPR2Q13873 1038 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 LPCAT4Q643R3 524 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 MFSD5Q6N075 450 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 C16orf86Q6ZW13 317 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 ZBTB46Q86UZ6 589 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 PCDHB18PQ96TA0 734 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 ASCC2Q9H1I8 757 aaPredicted RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
PALB2-206ENST00000568219 STK24Q9Y6E0 443 aa11.46□□□□□ -0.57
PALB2-206ENST00000568219 SEC24DO94855 1032 aaPredicted RBP11.46□□□□□ -0.58
PALB2-206ENST00000568219 CLPTM1O96005 669 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 AMPD1P23109 780 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 YARSP54577 528 aaKnown RBP11.46□□□□□ -0.58
PALB2-206ENST00000568219 USP46P62068 366 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 ZNF200P98182 395 aaPredicted RBP11.46□□□□□ -0.58
PALB2-206ENST00000568219 NFX1Q12986 1120 aaKnown RBP11.46□□□□□ -0.58
PALB2-206ENST00000568219 EFTUD2Q15029 972 aaKnown RBP eCLIP11.46□□□□□ -0.584e-10■■■□□ 17.8
PALB2-206ENST00000568219 PDK4Q16654 411 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.58
PALB2-206ENST00000568219 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 WDR60Q8WVS4 1066 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 TSNARE1Q96NA8 513 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 PREBQ9HCU5 417 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 LRRC42Q9Y546 428 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 ATRNO75882 1429 aa11.46□□□□□ -0.58
PALB2-206ENST00000568219 DENND3A2RUS2 1198 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 FAM86B1E9PN63 330 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 MCF2LO15068 1137 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 TGFB1I1O43294 461 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 PEX1O43933 1283 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 FAM86B2P0C5J1 330 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 CETPP11597 493 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 BPIFB4P59827 614 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 MGAT5Q09328 741 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 CYLC2Q14093 348 aaPredicted RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 AOC3Q16853 763 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 MAP3K21Q5TCX8 1036 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 MTHFD1LQ6UB35 978 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 RIPOR1Q6ZS17 1223 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 TRABD2AQ86V40 505 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 SREK1Q8WXA9 508 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 RIOX1Q9H6W3 641 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 DMAP1Q9NPF5 467 aaPredicted RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 XPO7Q9UIA9 1087 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 PIK3R2O00459 728 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 NEMP1O14524 444 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 ALAS1P13196 640 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 PSMA2P25787 234 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 SNRNP35Q16560 246 aaKnown RBP11.45□□□□□ -0.58
PALB2-206ENST00000568219 SLC44A4Q53GD3 710 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 CLEC4GQ6UXB4 293 aa11.45□□□□□ -0.58
PALB2-206ENST00000568219 PCGF5Q86SE9 256 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms