RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ANHXE9PGG2 379 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 GABRDO14764 452 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 MAPK13O15264 365 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 SEC24AO95486 1093 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 STAU1O95793 577 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 RPN1P04843 607 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 ODC1P11926 461 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 TAF6P49848 677 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 EPHA5P54756 1037 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 SMARCB1Q12824 385 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 PSMD6Q15008 389 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 CTXN3Q4LDR2 81 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 COBLL1Q53SF7 1204 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 TMEM31Q5JXX7 168 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 DPH6Q7L8W6 267 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 CBWD2Q8IUF1 395 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 GLYCTKQ8IVS8 523 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 UBALD2Q8IYN6 164 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 FSIP1Q8NA03 581 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 TDRD5Q8NAT2 981 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 XXYLT1Q8NBI6 393 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 NUP210Q8TEM1 1887 aaPredicted RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 FAM212AQ96EL1 285 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 ASIC4Q96FT7 647 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 PCIF1Q9H4Z3 704 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 PDE11AQ9HCR9 933 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 DNMT3BQ9UBC3 853 aaKnown RBP8.84□□□□□ -0.99
HDGFL3-205ENST00000568129 PTPRJQ12913 1337 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 CYB561D2O14569 222 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 XYLBO75191 536 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
HDGFL3-205ENST00000568129 PRR29P0C7W0 189 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 LAMP2P13473 410 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 RBP5P82980 135 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 SNRNP35Q16560 246 aaKnown RBP8.83□□□□□ -1
HDGFL3-205ENST00000568129 DUOXA2Q1HG44 320 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 SV2CQ496J9 727 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 LIN9Q5TKA1 542 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 OVOS1Q6IE37 1185 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 CENPPQ6IPU0 288 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 DSTYKQ6XUX3 929 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 TRIM67Q6ZTA4 783 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 HS2ST1Q7LGA3 356 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 TMEM86AQ8N2M4 240 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
HDGFL3-205ENST00000568129 OR5B17Q8NGF7 314 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 SLC7A14Q8TBB6 771 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 C2orf15Q8WU43 125 aaKnown RBP8.83□□□□□ -1
HDGFL3-205ENST00000568129 ZNF516Q92618 1163 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 ZNF560Q96MR9 790 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 MYADMQ96S97 322 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 PKMYT1Q99640 499 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 LRRC3Q9BY71 257 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 ZCWPW1Q9H0M4 648 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 EXOC1Q9NV70 894 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 LIMD1Q9UGP4 676 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 SORCS3Q9UPU3 1222 aa8.83□□□□□ -1
HDGFL3-205ENST00000568129 MYH10P35580 1976 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 ZDBF2Q9HCK1 2354 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 IKBKBO14920 756 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CLIC2O15247 247 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CST3P01034 146 aaPredicted RBP8.82□□□□□ -1
HDGFL3-205ENST00000568129 ITGB3P05106 788 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 PTPN2P17706 415 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 TFAMQ00059 246 aaKnown RBP8.82□□□□□ -1
HDGFL3-205ENST00000568129 FAM160A1Q05DH4 1040 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 ADCY1Q08828 1119 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 ZCWPW2Q504Y3 356 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 PRSS36Q5K4E3 855 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 WSCD1Q658N2 575 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 POTEHQ6S545 545 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 TRAPPC11Q7Z392 1133 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 GRASPQ7Z6J2 395 aaPredicted RBP8.82□□□□□ -1
HDGFL3-205ENST00000568129 USP37Q86T82 979 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 LRRTM3Q86VH5 581 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 NELFCDQ8IXH7 590 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CSGALNACT2Q8N6G5 542 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 TOP6BLQ8N6T0 577 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 OR10T2Q8NGX3 314 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 TMC2Q8TDI7 906 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 PARD3BQ8TEW8 1205 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 ANKRD36BP1Q96IX9 119 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 GSDMAQ96QA5 445 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CGRRF1Q99675 332 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 ACBD6Q9BR61 282 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CRISPLD1Q9H336 500 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 KCNK12Q9HB15 430 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 CDH7Q9ULB5 785 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 AGAP1Q9UPQ3 857 aa8.82□□□□□ -1
HDGFL3-205ENST00000568129 TIMM13Q9Y5L4 95 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms