RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ETAA1Q9NY74 926 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 GOLGA6AQ9NYA3 693 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 CFAP97Q9P2B7 532 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 KCNE5Q9UJ90 142 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 CDYLQ9Y232 598 aa4.94□□□□□ -1.62
HERPUD1-212ENST00000567944 UNC119BA6NIH7 251 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 TPP1O14773 563 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 SUV39H1O43463 412 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ZNF202O95125 648 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 SPATA31D3P0C874 917 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 KRT4P19013 534 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 DDX6P26196 483 aaKnown RBP eCLIP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ACVRL1P37023 503 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 SOX8P57073 446 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 POU6F2P78424 691 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ZXDAP98168 799 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 MC2RQ01718 297 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 TP53BP2Q13625 1128 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 BOP1Q14137 746 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 SPATA31D4Q6ZUB0 917 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 MAEAQ7L5Y9 396 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ZNF627Q7L945 461 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 DGKHQ86XP1 1220 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ARHGEF19Q8IW93 802 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 FAM43AQ8N2R8 423 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 FAM156AQ8NDB6 213 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 IL31RAQ8NI17 732 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 LARP4BQ92615 738 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 BOD1Q96IK1 185 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 MED15Q96RN5 788 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 P2RX7Q99572 595 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ALOXE3Q9BYJ1 711 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 TINAGL1Q9GZM7 467 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 ANKFY1Q9P2R3 1169 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 CPA4Q9UI42 421 aa4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 FRMPD2Q68DX3 1309 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-212ENST00000567944 CAPN8A6NHC0 703 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 MYO1FO00160 1098 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 KIF20AO95235 890 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 ZBED1O96006 694 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 GNAI3P08754 354 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 GNAI1P63096 354 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 GPSM2P81274 684 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 CNN3Q15417 329 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 GEN1Q17RS7 908 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 TIGD2Q4W5G0 525 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 USP37Q86T82 979 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 POC1BQ8TC44 478 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 BRIX1Q8TDN6 353 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 ASB10Q8WXI3 467 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 MTFMTQ96DP5 389 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 DPH1Q9BZG8 443 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 DDX21Q9NR30 783 aaKnown RBP eCLIP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 MED16Q9Y2X0 877 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 USP19O94966 1318 aa4.92□□□□□ -1.62
HERPUD1-212ENST00000567944 A0A1W2PS29 197 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 MYADML2A6NDP7 307 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 CDKL5O76039 1030 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 KITP10721 976 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 KCNA2P16389 499 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 RHCEP18577 417 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 PTGS2P35354 604 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 VAV2P52735 878 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 RHDQ02161 417 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 TAPT1Q6NXT6 567 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 SRGAP1Q7Z6B7 1085 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 AOPEPQ8N6M6 819 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 PROKR1Q8TCW9 393 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 TRIB1Q96RU8 372 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 TRIM54Q9BYV2 358 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 SMOC2Q9H3U7 446 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 SERHL2Q9H4I8 314 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 SARS2Q9NP81 518 aaKnown RBP4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 REXO2Q9Y3B8 237 aaKnown RBP4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 HS3ST3A1Q9Y663 406 aa4.91□□□□□ -1.62
HERPUD1-212ENST00000567944 COL4A3Q01955 1670 aa4.9□□□□□ -1.62
HERPUD1-212ENST00000567944 CCDC195A0A1B0GUA6 201 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 DCLK1O15075 740 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 TBX3O15119 743 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 ABHD16AO95870 558 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 CHEK2O96017 543 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 EGR2P11161 476 aaPredicted RBP4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 PIM1P11309 404 aaPredicted RBP4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 GATA3P23771 443 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 ZEB1P37275 1124 aaPredicted RBP4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 ZNF844Q08AG5 666 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 TAF2Q6P1X5 1199 aa4.9□□□□□ -1.63
HERPUD1-212ENST00000567944 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms