RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 DPP3Q9NY33 737 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 FAM237AA0A1B0GTK4 181 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 KPNA7A9QM74 516 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 POLR2DO15514 142 aaKnown RBP12.09□□□□□ -0.47
CDH3-206ENST00000567674 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
CDH3-206ENST00000567674 KRT37O76014 449 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 KIF20AO95235 890 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 RHOP08100 348 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 MAGEA9P43362 315 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 ME1P48163 572 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 EPHB3P54753 998 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 KRT85P78386 507 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 PRKCQQ04759 706 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 SEZ6Q53EL9 994 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 C1orf228Q6PIY5 440 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 ITIH5Q86UX2 942 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 PDILTQ8N807 584 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 ELSPBP1Q96BH3 223 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 NELL2Q99435 816 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 CDH22Q9UJ99 828 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 MRPS23Q9Y3D9 190 aaKnown RBP12.09□□□□□ -0.47
CDH3-206ENST00000567674 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
CDH3-206ENST00000567674 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 MYO10Q9HD67 2058 aa12.09□□□□□ -0.47
CDH3-206ENST00000567674 I3L4J1 428 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 CCL16O15467 120 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ASGR2P07307 311 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 CPB1P15086 417 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 GLULP15104 373 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 AOC1P19801 751 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ALDH1A3P47895 512 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 LHX1P48742 406 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 AP3M2P53677 418 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 STARD6P59095 220 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 RBP5P82980 135 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ENPEPQ07075 957 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 NFE2Q16621 373 aaPredicted RBP12.08□□□□□ -0.48
CDH3-206ENST00000567674 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 PRSS36Q5K4E3 855 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 FAM26FQ5R3K3 315 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ZBTB41Q5SVQ8 909 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 DCP1BQ8IZD4 617 aaKnown RBP12.08□□□□□ -0.48
CDH3-206ENST00000567674 TOP6BLQ8N6T0 577 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 LEO1Q8WVC0 666 aaPredicted RBP12.08□□□□□ -0.48
CDH3-206ENST00000567674 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
CDH3-206ENST00000567674 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ACBD6Q9BR61 282 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 FAM213AQ9BRX8 229 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 MFSD1Q9H3U5 465 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 ABCB6Q9NP58 842 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 RBAKQ9NYW8 714 aaPredicted RBP12.08□□□□□ -0.48
CDH3-206ENST00000567674 ZFHX4Q86UP3 3567 aa12.08□□□□□ -0.48
CDH3-206ENST00000567674 CYB561D2O14569 222 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 STAU1O95793 577 aaKnown RBP12.07□□□□□ -0.48
CDH3-206ENST00000567674 NFICP08651 508 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 MYBP10242 640 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
CDH3-206ENST00000567674 ASIC1P78348 528 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 KCNA1Q09470 495 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 MYO1EQ12965 1108 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 BECN1Q14457 450 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 PDZD4Q76G19 769 aaPredicted RBP12.07□□□□□ -0.48
CDH3-206ENST00000567674 GET4Q7L5D6 327 aaPredicted RBP12.07□□□□□ -0.48
CDH3-206ENST00000567674 WDR49Q8IV35 697 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 ADSSL1Q8N142 457 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 DEPDC1BQ8WUY9 529 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 DNASE1L2Q92874 299 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 PSMG2Q969U7 264 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 DHX58Q96C10 678 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 ANKRD36BP1Q96IX9 119 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
CDH3-206ENST00000567674 ZCWPW1Q9H0M4 648 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 ASAH2Q9NR71 780 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 OBP2AQ9NY56 170 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 FBXL21Q9UKT6 434 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 POLIQ9UNA4 740 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 NUMBLQ9Y6R0 609 aa12.07□□□□□ -0.48
CDH3-206ENST00000567674 MYH15Q9Y2K3 1946 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 A0A1W2PQ27 194 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 A0A1W2PQ64 194 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms