RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 RHDQ02161 417 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 LAMTOR4Q0VGL1 99 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 PLD1Q13393 1074 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 RUNX3Q13761 415 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-216ENST00000567071 PRR16Q569H4 304 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 C2orf27AQ580R0 203 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 COLEC12Q5KU26 742 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 RASSF3Q86WH2 238 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 RDM1Q8NG50 284 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 GKN1Q9NS71 199 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 CEP72Q9P209 647 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 DNMT3LQ9UJW3 386 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 MAFFQ9ULX9 164 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 TMEM150BA6NC51 233 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 TMEM189-UBE2V1I3L0A0 370 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 SEC24AO95486 1093 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 NPTXRO95502 500 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 P2RY2P41231 377 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 CYP4A11Q02928 519 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 PEAR1Q5VY43 1037 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 MIER3Q7Z3K6 550 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 OR2I1PQ8NGU4 316 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 WHAMMQ8TF30 809 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 SETD7Q8WTS6 366 aaKnown RBP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 KCNB2Q92953 911 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 JAKMIP1Q96N16 626 aaKnown RBP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 CEP89Q96ST8 783 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 TEKT3Q9BXF9 490 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 BCCIPQ9P287 314 aaKnown RBP eCLIP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CAPN3-216ENST00000567071 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
CAPN3-216ENST00000567071 PCDH15Q96QU1 1955 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 AHCTF1Q8WYP5 2266 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 CEP192Q8TEP8 1941 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 SMCO2A6NFE2 343 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 CCDC69A6NI79 296 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 hCG_1984214I3L0E3 225 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 CPA1P15085 419 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 GALK1P51570 392 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 EPHB3P54753 998 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 ANAPC15P60006 121 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 CXADRP78310 365 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 TFDP1Q14186 410 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 NBR1Q14596 966 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 GPR158Q5T848 1215 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 WWC2Q6AWC2 1192 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 ZNF713Q8N859 430 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-216ENST00000567071 DAGLBQ8NCG7 672 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 MDGA1Q8NFP4 955 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 NCOA7Q8NI08 942 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 RIT2Q99578 217 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 CDC6Q99741 560 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 ATXN3LQ9H3M9 355 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 AFF4Q9UHB7 1163 aaKnown RBP10.67□□□□□ -0.7
CAPN3-216ENST00000567071 IL17BQ9UHF5 180 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 HEMK1Q9Y5R4 338 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-216ENST00000567071 ARID2Q68CP9 1835 aa10.67□□□□□ -0.7
CAPN3-216ENST00000567071 KIAA1549LQ6ZVL6 1849 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 E7EWF7 191 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 KRT38O76015 456 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 GP1BBP13224 206 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 RFC5P40937 340 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 CAMK2BQ13554 666 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 STXBP5Q5T5C0 1151 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 LRCH2Q5VUJ6 765 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 JAKMIP3Q5VZ66 844 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 CC2D1AQ6P1N0 951 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-216ENST00000567071 PCSK4Q6UW60 755 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 RLN3Q8WXF3 142 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 CD101Q93033 1021 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 UROC1Q96N76 676 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 GCNAQ96QF7 691 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 EBF3Q9H4W6 596 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 KCNK4Q9NYG8 393 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 PCOLCE2Q9UKZ9 415 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 PLXND1Q9Y4D7 1925 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 C2CD3Q4AC94 2353 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 MYO16Q9Y6X6 1858 aa10.66□□□□□ -0.7
CAPN3-216ENST00000567071 FLNCQ14315 2725 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 ZNF638Q14966 1978 aaKnown RBP10.65□□□□□ -0.7
CAPN3-216ENST00000567071 PTPRDP23468 1912 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 MARCH6O60337 910 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms