RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 SCARA3Q6AZY7 606 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 FOXR2Q6PJQ5 311 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 FILIP1Q7Z7B0 1213 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 HPDLQ96IR7 371 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 CLDND1Q9NY35 253 aa17.59■□□□□ 0.41
SCAMP2-208ENST00000566557 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 CYB561D2O14569 222 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 STX10O60499 249 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 ADH1AP07327 375 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 PAX3P23760 479 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 ERCC5P28715 1186 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 AARSP49588 968 aaKnown RBP eCLIP17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 NDUFV1P49821 464 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 MXI1P50539 228 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 YWHAHQ04917 246 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 NFKBIBQ15653 356 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 C1orf220Q5T0J3 134 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 ZNF280DQ6N043 979 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 C11orf57Q6ZUT1 292 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 ANKS3Q6ZW76 656 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 KLHL5Q96PQ7 755 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 CDCA3Q99618 268 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 SNX9Q9Y5X1 595 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 IRAK3Q9Y616 596 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 PLXNA3P51805 1871 aa17.58■□□□□ 0.4
SCAMP2-208ENST00000566557 SYCE3A1L190 88 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 H3BQ06 376 aaPredicted RBP17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 H7C4K7 107 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 M0QZQ0 153 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 IKBKBO14920 756 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 TEX28O15482 410 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 LINC01565O15544 149 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 HUS1O60921 280 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CLASP2O75122 1294 aaKnown RBP17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 GNA14O95837 355 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 SRGAP2BP0DMP2 458 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 ARPP19P56211 112 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 MYL6P60660 151 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CLDN10P78369 228 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 PPP3CAQ08209 521 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 NCOA4Q13772 614 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 ZNF699Q32M78 642 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CTXN3Q4LDR2 81 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 OVOS1Q6IE37 1185 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 SV2AQ7L0J3 742 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CXorf38Q8TB03 319 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 LNX1Q8TBB1 728 aaPredicted RBP17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 BORCS6Q96GS4 357 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 CNOT6LQ96LI5 555 aaKnown RBP17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 DNAJC25Q9H1X3 360 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.57■□□□□ 0.46e-10■■■■■ 49.7
SCAMP2-208ENST00000566557 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 USP34Q70CQ2 3546 aa17.57■□□□□ 0.4
SCAMP2-208ENST00000566557 MYO7AQ13402 2215 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 LILRB3O75022 631 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 CST3P01034 146 aaPredicted RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 C4BPAP04003 597 aaKnown RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 TNNC1P63316 161 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 ENPEPQ07075 957 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 ZACNQ401N2 412 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 HSP90AA4PQ58FG1 418 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 SCARA5Q6ZMJ2 495 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 HFE2Q6ZVN8 426 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 EFHBQ8N7U6 833 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 MED15Q96RN5 788 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 MMS19Q96T76 1030 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 IMPG2Q9BZV3 1241 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 RXFP1Q9HBX9 757 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 TMEM8AQ9HCN3 771 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 FNIP2Q9P278 1114 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 MAGEC2Q9UBF1 373 aaPredicted RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 NXF1Q9UBU9 619 aaKnown RBP17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 DSEQ9UL01 958 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 CDY1Q9Y6F8 540 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 CFAP54Q96N23 3096 aa17.56■□□□□ 0.4
SCAMP2-208ENST00000566557 VNN1O95497 513 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 GLUD1P00367 558 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 CPB1P15086 417 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 EPCAMP16422 314 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 TYMPP19971 482 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 OR1D2P34982 312 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 MTIF2P46199 727 aaKnown RBP17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 MYL7Q01449 175 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 CT47A1Q5JQC4 288 aaPredicted RBP17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
SCAMP2-208ENST00000566557 KRT39Q6A163 491 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms