RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 EPHB3P54753 998 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 CRELD2Q6UXH1 353 aaPredicted RBP21.82■■□□□ 1.08
CLN6-207ENST00000566347 LRRC27Q9C0I9 530 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 IKZF4Q9H2S9 585 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 ZFP14Q9HCL3 533 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 PANK4Q9NVE7 773 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 HSFX1Q9UBD0 423 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 SCN1AP35498 2009 aa21.82■■□□□ 1.08
CLN6-207ENST00000566347 TSC2P49815 1807 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 KANSL1LA0AUZ9 987 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 PPP6R2O75170 966 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 VNN2O95498 520 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 LDHAP00338 332 aaKnown RBP21.81■■□□□ 1.08
CLN6-207ENST00000566347 DCNP07585 359 aaKnown RBP21.81■■□□□ 1.08
CLN6-207ENST00000566347 MYL4P12829 197 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 GARTP22102 1010 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 ALDH1A3P47895 512 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 KCNA1Q09470 495 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 DUSP4Q13115 394 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 FAM78AQ5JUQ0 283 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 TANGO2Q6ICL3 276 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 CENPPQ6IPU0 288 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 METTL23Q86XA0 190 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 CCDC65Q8IXS2 484 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 HS6ST3Q8IZP7 471 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 SYCP3Q8IZU3 236 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 PDILTQ8N807 584 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 ASB16Q96NS5 453 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 DDX23Q9BUQ8 820 aaKnown RBP21.81■■□□□ 1.08
CLN6-207ENST00000566347 FOXQ1Q9C009 403 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 TNMDQ9H2S6 317 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 TMEM206Q9H813 350 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 DLGAP2Q9P1A6 1054 aa21.81■■□□□ 1.08
CLN6-207ENST00000566347 MTMR11A4FU01 709 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 FCARP24071 287 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 CASP5P51878 434 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 POTEHQ6S545 545 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 FRMD5Q7Z6J6 570 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 EFCAB13Q8IY85 973 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 SMARCD2Q92925 531 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 ZNF560Q96MR9 790 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 FAM213AQ9BRX8 229 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 OSBPL6Q9BZF3 934 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 PLA2G2FQ9BZM2 168 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 GPR88Q9GZN0 384 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 CUEDC2Q9H467 287 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 ASB3Q9Y575 518 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 MIA3Q5JRA6 1907 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 VPS13AQ96RL7 3174 aa21.8■■□□□ 1.08
CLN6-207ENST00000566347 MYO15AQ9UKN7 3530 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 TCHHQ07283 1943 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 CYB561D2O14569 222 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 MOSPD3O75425 235 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 YEATS4O95619 227 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 PNPLA4P41247 253 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 SV2CQ496J9 727 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 STXBP4Q6ZWJ1 553 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 HSCBQ8IWL3 235 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 BRSK2Q8IWQ3 736 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 THEM5Q8N1Q8 247 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 DNASE1L2Q92874 299 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 NKD2Q969F2 451 aaPredicted RBP21.79■■□□□ 1.08
CLN6-207ENST00000566347 PYM1Q9BRP8 204 aaKnown RBP21.79■■□□□ 1.08
CLN6-207ENST00000566347 CRISPLD1Q9H336 500 aa21.79■■□□□ 1.08
CLN6-207ENST00000566347 PRR23AA6NEV1 266 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 AMPD3Q01432 767 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 SMARCB1Q12824 385 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 ATAD1Q8NBU5 361 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 OR10T2Q8NGX3 314 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 CACTINQ8WUQ7 758 aaKnown RBP21.78■■□□□ 1.08
CLN6-207ENST00000566347 SAAL1Q96ER3 474 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 TMEM209Q96SK2 561 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 TRMT61BQ9BVS5 477 aaKnown RBP21.78■■□□□ 1.08
CLN6-207ENST00000566347 BCO2Q9BYV7 579 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 ZCWPW1Q9H0M4 648 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 DNAJC25Q9H1X3 360 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 TRPV4Q9HBA0 871 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 RBAKQ9NYW8 714 aaPredicted RBP21.78■■□□□ 1.08
CLN6-207ENST00000566347 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
CLN6-207ENST00000566347 SLC27A5Q9Y2P5 690 aa21.78■■□□□ 1.08
CLN6-207ENST00000566347 RIF1Q5UIP0 2472 aaKnown RBP21.78■■□□□ 1.08
CLN6-207ENST00000566347 KPNA7A9QM74 516 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 KIAA0391O15091 583 aaKnown RBP21.77■■□□□ 1.08
CLN6-207ENST00000566347 CUTAO60888 179 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 FGF19O95750 216 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 HSP90AA1P07900 732 aaKnown RBP21.77■■□□□ 1.08
CLN6-207ENST00000566347 MAGEA9P43362 315 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 TUFMP49411 452 aaKnown RBP21.77■■□□□ 1.08
CLN6-207ENST00000566347 TFAMQ00059 246 aaKnown RBP21.77■■□□□ 1.08
CLN6-207ENST00000566347 UBXN2BQ14CS0 331 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 TEAD2Q15562 447 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 SLC39A12Q504Y0 691 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 TPRG1Q6ZUI0 275 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 ASCL5Q7RTU5 278 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 ITIH5Q86UX2 942 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 TMC8Q8IU68 726 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 C1orf210Q8IVY1 113 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 SHKBP1Q8TBC3 707 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 ZSCAN18Q8TBC5 510 aaPredicted RBP21.77■■□□□ 1.08
CLN6-207ENST00000566347 C2orf15Q8WU43 125 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms