RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 USP38Q8NB14 1042 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 SLC43A3Q8NBI5 491 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM40Q8WWA1 233 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CISHQ9NSE2 258 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 KIAA1257Q9ULG3 409 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 UMODL1Q5DID0 1318 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 MED7O43513 233 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 BUB1BO60566 1050 aaPredicted RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 CILPO75339 1184 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 TRPA1O75762 1119 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 H2AFXP16104 143 aaPredicted RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PAX3P23760 479 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 LRPAP1P30533 357 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PAFAH1B1P43034 410 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 VEGFBP49765 207 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 RAB27AP51159 221 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 OSTNP61366 133 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF200P98182 395 aaPredicted RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 TRIM32Q13049 653 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 STILQ15468 1287 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ELF2Q15723 593 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 KCNA10Q16322 511 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ERCC6LQ2NKX8 1250 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 CFAP221Q4G0U5 840 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 LIN9Q5TKA1 542 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 MON1BQ7L1V2 547 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PEX26Q7Z412 305 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 LIMS2Q7Z4I7 341 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 HACE1Q8IYU2 909 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 LRRN4CLQ8ND94 238 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 CD99L2Q8TCZ2 262 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 RAET1EQ8TD07 263 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ACTRT1Q8TDG2 376 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF606Q8WXB4 792 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PPP1R16BQ96T49 567 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 EIF2AQ9BY44 585 aaKnown RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 CARD9Q9H257 536 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 SEPT11Q9NVA2 429 aaKnown RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 AMFRQ9UKV5 643 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 RAB21Q9UL25 225 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PIN4Q9Y237 131 aaKnown RBP9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 CDY2AQ9Y6F7 541 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 SCINQ9Y6U3 715 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
LSM3P5-201ENST00000566307 PIRO00625 290 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 GPR182O15218 404 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF623O75123 536 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 RECQL4O94761 1208 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 FTCDO95954 541 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ITGB3P05106 788 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 CALB1P05937 261 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ELNP15502 786 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ABCB4P21439 1286 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 FGFR4P22455 802 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 MMP8P22894 467 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 MCM3P25205 808 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 CTNNA2P26232 953 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 SLC1A1P43005 524 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM62Q0P6H9 643 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 PTP4A2Q12974 167 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 TRIM71Q2Q1W2 868 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 PLEKHA7Q6IQ23 1121 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 WDR93Q6P2C0 686 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 MRPL10Q7Z7H8 261 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 DAAM2Q86T65 1068 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 UNC93AQ86WB7 457 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 PDCL2Q8N4E4 241 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF784Q8NCA9 323 aaPredicted RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM35BQ8NCS4 154 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 SMG8Q8ND04 991 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 COG1Q8WTW3 980 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF560Q96MR9 790 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 MMS19Q96T76 1030 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 SELENOOQ9BVL4 669 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 WNT8AQ9H1J5 351 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 MRPL47Q9HD33 250 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ERVK-5Q9HDB9 667 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ACP6Q9NPH0 428 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 ARGLU1Q9NWB6 273 aaPredicted RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 GDAP2Q9NXN4 497 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 SNTG2Q9NY99 539 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 CTTNBP2NLQ9P2B4 639 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms