RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CFAP54Q96N23 3096 aa19.85■□□□□ 0.77
USB1-213ENST00000566292 PTPRZ1P23471 2315 aaPredicted RBP19.84■□□□□ 0.77
USB1-213ENST00000566292 ODC1P11926 461 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 GJA1P17302 382 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 GAP43P17677 238 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 NASPP49321 788 aaPredicted RBP19.84■□□□□ 0.77
USB1-213ENST00000566292 CASP5P51878 434 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 PFKPQ01813 784 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 PRKCQQ04759 706 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 DUSP4Q13115 394 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 MYBPC2Q14324 1141 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 CYP4A22Q5TCH4 519 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 CCDC73Q6ZRK6 1079 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 EFCAB13Q8IY85 973 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 POMGNT1Q8WZA1 660 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 ZSWIM3Q96MP5 696 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 FGFBP2Q9BYJ0 223 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 DNAJC25Q9H1X3 360 aa19.84■□□□□ 0.77
USB1-213ENST00000566292 MTF2Q9Y483 593 aaPredicted RBP19.84■□□□□ 0.77
USB1-213ENST00000566292 KANSL1LA0AUZ9 987 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 FRMD3A2A2Y4 597 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 MTMR11A4FU01 709 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 CYP11A1P05108 521 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 MYL4P12829 197 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 PAX3P23760 479 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 STAT6P42226 847 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 POU5F1Q01860 360 aaKnown RBP19.83■□□□□ 0.77
USB1-213ENST00000566292 L1TD1Q5T7N2 865 aaKnown RBP19.83■□□□□ 0.77
USB1-213ENST00000566292 CENPPQ6IPU0 288 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 TTC9BQ8N6N2 239 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 ATAD1Q8NBU5 361 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 ZSWIM2Q8NEG5 633 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 OR10T2Q8NGX3 314 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 ASB16Q96NS5 453 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 LRRC3Q9BY71 257 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 ASAH2Q9NR71 780 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 OLFML3Q9NRN5 406 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 DPP3Q9NY33 737 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 SLC27A5Q9Y2P5 690 aa19.83■□□□□ 0.77
USB1-213ENST00000566292 GCNT3O95395 438 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 IDEP14735 1019 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 CD72P21854 359 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 WNT7BP56706 349 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 POSTNQ15063 836 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 TMC8Q8IU68 726 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 LEMD2Q8NC56 503 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 LINC00301Q8NCQ3 95 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 SHKBP1Q8TBC3 707 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 NKD2Q969F2 451 aaPredicted RBP19.82■□□□□ 0.76
USB1-213ENST00000566292 ACCSQ96QU6 501 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 ZFP14Q9HCL3 533 aa19.82■□□□□ 0.76
USB1-213ENST00000566292 NUP210Q8TEM1 1887 aaPredicted RBP19.82■□□□□ 0.76
USB1-213ENST00000566292 NCANO14594 1321 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 SHISA7A6NL88 538 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 SOAT2O75908 522 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 TAF6P49848 677 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 PLD1Q13393 1074 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 GRM2Q14416 872 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 UBXN2BQ14CS0 331 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 STK38Q15208 465 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 TEAD2Q15562 447 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 C1orf210Q8IVY1 113 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 PDILTQ8N807 584 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 SMARCD2Q92925 531 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 BORCS6Q96GS4 357 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 FAM213AQ9BRX8 229 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 LTB4R2Q9NPC1 389 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 HEBP1Q9NRV9 189 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 EXOC7Q9UPT5 735 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 WDR87Q6ZQQ6 2873 aa19.81■□□□□ 0.76
USB1-213ENST00000566292 F5P12259 2224 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 DENND4CQ5VZ89 1909 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 CYB561D2O14569 222 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 IL18RAPO95256 599 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 EPHB3P54753 998 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 ARMCX5Q6P1M9 558 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 VITQ6UXI7 678 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 TPRG1Q6ZUI0 275 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 ZSCAN18Q8TBC5 510 aaPredicted RBP19.8■□□□□ 0.76
USB1-213ENST00000566292 SAAL1Q96ER3 474 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
USB1-213ENST00000566292 OSBPL6Q9BZF3 934 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 ZCWPW1Q9H0M4 648 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 PANK4Q9NVE7 773 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 PCDHB13Q9Y5F0 798 aa19.8■□□□□ 0.76
USB1-213ENST00000566292 SPTBN4Q9H254 2564 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 GVINP1Q7Z2Y8 2422 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 A0A1W2PRU2 124 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 FAM170BA6NMN3 283 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 TARSP26639 723 aaKnown RBP19.79■□□□□ 0.76
USB1-213ENST00000566292 VIPR2P41587 438 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 ALDH1A3P47895 512 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 CDR1P51861 262 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 E2F4Q16254 413 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 WSCD1Q658N2 575 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 NT5DC4Q86YG4 428 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 BRSK2Q8IWQ3 736 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 MAML2Q8IZL2 1156 aaPredicted RBP19.79■□□□□ 0.76
USB1-213ENST00000566292 DNASE1L2Q92874 299 aa19.79■□□□□ 0.76
USB1-213ENST00000566292 CBWD1Q9BRT8 395 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms