RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 KANSL3Q9P2N6 904 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 PRKAG2Q9UGJ0 569 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 NOCTQ9UK39 431 aaKnown RBP20.04■□□□□ 0.8
COMMD4-213ENST00000565834 A0A087X0T9 212 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 USP27XA6NNY8 438 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 FAM228BP0C875 321 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 TNFAIP3P21580 790 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 CLCNKBP51801 687 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 ZNF132P52740 706 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 LILRA4P59901 499 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 CYP27A1Q02318 531 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 NOP9Q86U38 636 aaKnown RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 NPAS4Q8IUM7 802 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 RPUSD2Q8IZ73 545 aaKnown RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 TTC39CQ8N584 583 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 SLC20A1Q8WUM9 679 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 DDX27Q96GQ7 796 aaKnown RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 UROC1Q96N76 676 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 GDAP2Q9NXN4 497 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 CACNG4Q9UBN1 327 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 REXO2Q9Y3B8 237 aaKnown RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 ZNF263O14978 683 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 SPTLC1O15269 473 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 PFKMP08237 780 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 COL13A1Q5TAT6 717 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 GLYCTKQ8IVS8 523 aa20.03■□□□□ 0.8
COMMD4-213ENST00000565834 SEPT11Q9NVA2 429 aaKnown RBP20.03■□□□□ 0.8
COMMD4-213ENST00000565834 FNDC1Q4ZHG4 1894 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-213ENST00000565834 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 DDX3XO00571 662 aaKnown RBP eCLIP20.02■□□□□ 0.88e-14■■□□□ 12.4
COMMD4-213ENST00000565834 ZNF500O60304 480 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-213ENST00000565834 GNA15P30679 374 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 RNASELQ05823 741 aaKnown RBP20.02■□□□□ 0.8
COMMD4-213ENST00000565834 UPP1Q16831 310 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 ZNF394Q53GI3 561 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 TAF3Q5VWG9 929 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 CRIPAKQ8N1N5 446 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 LNX1Q8TBB1 728 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-213ENST00000565834 PPP1R13BQ96KQ4 1090 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 LUC7LQ9NQ29 371 aaKnown RBP20.02■□□□□ 0.8
COMMD4-213ENST00000565834 TBC1D13Q9NVG8 400 aa20.02■□□□□ 0.8
COMMD4-213ENST00000565834 CILPO75339 1184 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 CDR2Q01850 454 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 INCA1Q0VD86 236 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.01■□□□□ 0.79
COMMD4-213ENST00000565834 KIAA1328Q86T90 577 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 ZNF677Q86XU0 584 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 SLC30A5Q8TAD4 765 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 OLIG1Q8TAK6 271 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 FAM193BQ96PV7 902 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-213ENST00000565834 PAAF1Q9BRP4 392 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 BARX2Q9UMQ3 279 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-213ENST00000565834 PCDHA13Q9Y5I0 950 aa20.01■□□□□ 0.79
COMMD4-213ENST00000565834 GOLGA6L9A6NEM1 432 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 HUS1O60921 280 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 CALCAP01258 141 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 CHRNB2P17787 502 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 DSC1Q08554 894 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 SOWAHAQ2M3V2 549 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 REXO1L1PQ8IX06 675 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 APPL2Q8NEU8 664 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 RSPH1Q8WYR4 309 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 DDX1Q92499 740 aaKnown RBP20■□□□□ 0.79
COMMD4-213ENST00000565834 RABGGTAQ92696 567 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 CASD1Q96PB1 797 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 PUF60Q9UHX1 559 aaKnown RBP20■□□□□ 0.79
COMMD4-213ENST00000565834 NAGPAQ9UK23 515 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 THAP12O43422 761 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 EFCAB14O75071 495 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 MMEP08473 750 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 MAGEA1P43355 309 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 GATMP50440 423 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 FMO1Q01740 532 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 CCDC122Q5T0U0 273 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 C10orf76Q5T2E6 689 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 ALKBH5Q6P6C2 394 aaKnown RBP20■□□□□ 0.79
COMMD4-213ENST00000565834 ZNF280BQ86YH2 543 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 C7orf61Q8IZ16 206 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 TOP6BLQ8N6T0 577 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 C3orf58Q8NDZ4 430 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 WHAMMQ8TF30 809 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 MRPL45Q9BRJ2 306 aaKnown RBP20■□□□□ 0.79
COMMD4-213ENST00000565834 MRPL9Q9BYD2 267 aaKnown RBP20■□□□□ 0.79
COMMD4-213ENST00000565834 IL23AQ9NPF7 189 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 HMGXB4Q9UGU5 601 aa20■□□□□ 0.79
COMMD4-213ENST00000565834 CYB561D2O14569 222 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 TACC1O75410 805 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 B3GAT3O94766 335 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 DDHD2O94830 711 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 PAEPP09466 180 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 PAX3P23760 479 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 VAV2P52735 878 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 NDST1P52848 882 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 RAD23BP54727 409 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 DPH6Q7L8W6 267 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 TXLNBQ8N3L3 684 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 SENP8Q96LD8 212 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 NENFQ9UMX5 172 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 L1RE1Q9UN81 338 aa19.99■□□□□ 0.79
COMMD4-213ENST00000565834 TBKBP1A7MCY6 615 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms