RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DCP1BQ8IZD4 617 aaKnown RBP18.07■□□□□ 0.48
USB1-211ENST00000565662 TMEM86AQ8N2M4 240 aa18.07■□□□□ 0.48
USB1-211ENST00000565662 E2F7Q96AV8 911 aa18.07■□□□□ 0.48
USB1-211ENST00000565662 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
USB1-211ENST00000565662 KPNA7A9QM74 516 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 ECI2O75521 394 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 SLFN14P0C7P3 912 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
USB1-211ENST00000565662 MYO1EQ12965 1108 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 PSMD2Q13200 908 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 VEPH1Q14D04 833 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 CRELD2Q6UXH1 353 aaPredicted RBP18.06■□□□□ 0.48
USB1-211ENST00000565662 SLC44A3Q8N4M1 653 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 ZNF507Q8TCN5 953 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 SPPL2BQ8TCT7 592 aa18.06■□□□□ 0.48
USB1-211ENST00000565662 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
USB1-211ENST00000565662 ZDBF2Q9HCK1 2354 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 CYB561D2O14569 222 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 TNNC2P02585 160 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 CMA1P23946 247 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 CASP5P51878 434 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 EPHA5P54756 1037 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 RBP5P82980 135 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 TFAMQ00059 246 aaKnown RBP18.05■□□□□ 0.48
USB1-211ENST00000565662 TSPY1Q01534 308 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 NFE2Q16621 373 aaPredicted RBP18.05■□□□□ 0.48
USB1-211ENST00000565662 BMT2Q1RMZ1 405 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
USB1-211ENST00000565662 PHLDB3Q6NSJ2 640 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 DPH6Q7L8W6 267 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 WDR49Q8IV35 697 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 NPAS3Q8IXF0 933 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
USB1-211ENST00000565662 YIPF1Q9Y548 306 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 NUMBLQ9Y6R0 609 aa18.05■□□□□ 0.48
USB1-211ENST00000565662 TISP43B9A030 160 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 HUS1O60921 280 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 PRPF6O94906 941 aaKnown RBP18.04■□□□□ 0.48
USB1-211ENST00000565662 AOC1P19801 751 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 MAGEA9P43362 315 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 MYL7Q01449 175 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 PRKCQQ04759 706 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 EHHADHQ08426 723 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 KCNA1Q09470 495 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 TWF1Q12792 350 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 EPM2AIP1Q7L775 607 aaPredicted RBP18.04■□□□□ 0.48
USB1-211ENST00000565662 C12orf56Q8IXR9 622 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 EFCAB13Q8IY85 973 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 ELSPBP1Q96BH3 223 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 FNBP1Q96RU3 617 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 CORO1BQ9BR76 489 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 EXOC1Q9NV70 894 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 HSPBP1Q9NZL4 362 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 MUC6Q6W4X9 2439 aa18.04■□□□□ 0.48
USB1-211ENST00000565662 TRIOO75962 3097 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 MTMR11A4FU01 709 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 GALR2O43603 387 aaPredicted RBP18.03■□□□□ 0.48
USB1-211ENST00000565662 IGFBP6P24592 240 aaPredicted RBP18.03■□□□□ 0.48
USB1-211ENST00000565662 PCSK1P29120 753 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 LHX1P48742 406 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 DUOXA2Q1HG44 320 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 RNF19BQ6ZMZ0 732 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 SIX5Q8N196 739 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 TOP6BLQ8N6T0 577 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 XXYLT1Q8NBI6 393 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 TMEM174Q8WUU8 243 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 DEPDC1BQ8WUY9 529 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
USB1-211ENST00000565662 DNASE1L2Q92874 299 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 SAAL1Q96ER3 474 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 GCNAQ96QF7 691 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 ARHGEF3Q9NR81 526 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 GDAP2Q9NXN4 497 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 SCN1AP35498 2009 aa18.03■□□□□ 0.48
USB1-211ENST00000565662 ITGB3P05106 788 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 POLR2BP30876 1174 aaKnown RBP18.02■□□□□ 0.48
USB1-211ENST00000565662 GUCY2FP51841 1108 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 AP3M2P53677 418 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.48
USB1-211ENST00000565662 ARHGAP15Q53QZ3 475 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 PRSS36Q5K4E3 855 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 CENPPQ6IPU0 288 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.48
USB1-211ENST00000565662 ITFG1Q8TB96 612 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 PSMG2Q969U7 264 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 MSANTD3Q96H12 275 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 ZCWPW1Q9H0M4 648 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 ZFP14Q9HCL3 533 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 ABCB6Q9NP58 842 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 AGPAT3Q9NRZ7 376 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 RAPGEFL1Q9UHV5 662 aa18.02■□□□□ 0.48
USB1-211ENST00000565662 TIMM13Q9Y5L4 95 aaPredicted RBP18.02■□□□□ 0.48
USB1-211ENST00000565662 A0A1W2PQ27 194 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 A0A1W2PQ64 194 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 A0A1W2PQD8 194 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 SOBPA7XYQ1 873 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 SEC24AO95486 1093 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 FAM163BP0C2L3 166 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms