RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CHD9Q3L8U1 2897 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 CLSTN1O94985 981 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 PLEKP08567 350 aaPredicted RBP20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 ATF7P17544 494 aaPredicted RBP20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 POLR2BP30876 1174 aaKnown RBP20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 KCNQ1P51787 676 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 KIF11P52732 1056 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 BPIFB4P59827 614 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 MYO1EQ12965 1108 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 PLEKHG4Q58EX7 1191 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 SPOPLQ6IQ16 392 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 SLC24A5Q71RS6 500 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 ECHDC2Q86YB7 292 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 HERC6Q8IVU3 1022 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 TXLNBQ8N3L3 684 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 TTC39CQ8N584 583 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 LRRC52Q8N7C0 313 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 SEPT8Q92599 483 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 RPS6KC1Q96S38 1066 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 LUC7LQ9NQ29 371 aaKnown RBP20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 KLK14Q9P0G3 267 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 CNTN6Q9UQ52 1028 aa20.44■□□□□ 0.86
CSPG4P13-201ENST00000565545 C9IYK1 514 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 NBNO60934 754 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 POU3F3P20264 500 aaPredicted RBP20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 FAM189BP81408 668 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 PTK2Q05397 1052 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 BMS1Q14692 1282 aaKnown RBP20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 AGMOQ6ZNB7 445 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 HPDLQ96IR7 371 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 PPP1R10Q96QC0 940 aaKnown RBP20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 RSAD1Q9HA92 442 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 CYP3A43Q9HB55 503 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 NCOR1O75376 2440 aa20.43■□□□□ 0.86
CSPG4P13-201ENST00000565545 ANO9A1A5B4 782 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 INPPL1O15357 1258 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 CXCL10P02778 98 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 ACO1P21399 889 aaKnown RBP20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 LRPAP1P30533 357 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 USP8P40818 1118 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 PNPLA4P41247 253 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 TAP1Q03518 808 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 SLC18A3Q16572 532 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 GLRA4Q5JXX5 417 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 C10orf76Q5T2E6 689 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF662Q6ZS27 426 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF571Q7Z3V5 609 aaPredicted RBP20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF598Q86UK7 904 aaKnown RBP20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 UBR7Q8N806 425 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF560Q96MR9 790 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 DESI2Q9BSY9 194 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 C1QTNF1Q9BXJ1 281 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 BCO2Q9BYV7 579 aa20.42■□□□□ 0.86
CSPG4P13-201ENST00000565545 EPOPA6NHQ4 379 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 PIRO00625 290 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 PTGESO14684 152 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 TLL1O43897 1013 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 THP07101 528 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 PNMA6AP0CW24 399 aaPredicted RBP20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 KRT5P13647 590 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 CLCN1P35523 988 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 GPNMBQ14956 572 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 WDR72Q3MJ13 1102 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 C9orf57Q5W0N0 161 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 RTN4RL1Q86UN2 441 aaPredicted RBP20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 C18orf25Q96B23 403 aaPredicted RBP20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 PPP1R13BQ96KQ4 1090 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 GAD1Q99259 594 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZBED2Q9BTP6 218 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 CXCL16Q9H2A7 254 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 ELAC1Q9H777 363 aaKnown RBP20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 TUBGCP4Q9UGJ1 667 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 COG5Q9UP83 839 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 PCDHB4Q9Y5E5 795 aa20.41■□□□□ 0.86
CSPG4P13-201ENST00000565545 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 CYP26A1O43174 497 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 ATP8B3O60423 1300 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 TUBB4AP04350 444 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 TNFAIP3P21580 790 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 MLH1P40692 756 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 ASPAP45381 313 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 GUCY2FP51841 1108 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 TNNC1P63316 161 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 SCARA3Q6AZY7 606 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 ZNF677Q86XU0 584 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 REXO1L1PQ8IX06 675 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 C17orf53Q8N3J3 647 aaPredicted RBP20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 ACRBPQ8NEB7 543 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 GSTCDQ8NEC7 633 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 DBF4BQ8NFT6 615 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 LPPQ93052 612 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 ARID3AQ99856 593 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 AGPAT1Q99943 283 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 SYT11Q9BT88 431 aa20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.4■□□□□ 0.86
CSPG4P13-201ENST00000565545 TRMT1Q9NXH9 659 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms