RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SMG7Q92540 1137 aaKnown RBP16.64■□□□□ 0.25
COMMD4-212ENST00000565517 RPGRIP1Q96KN7 1286 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 WDR6Q9NNW5 1121 aaKnown RBP16.64■□□□□ 0.25
COMMD4-212ENST00000565517 AGAP1Q9UPQ3 857 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 TIMM13Q9Y5L4 95 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-212ENST00000565517 PI4K2BG5E9Z4 385 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-212ENST00000565517 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
COMMD4-212ENST00000565517 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-212ENST00000565517 NR3C1P04150 777 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 ELF1P32519 619 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 COBLL1Q53SF7 1204 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 METTL23Q86XA0 190 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 TCEAL8Q8IYN2 117 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 SLC7A14Q8TBB6 771 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 CGRRF1Q99675 332 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 PIDD1Q9HB75 910 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 GDAP2Q9NXN4 497 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
COMMD4-212ENST00000565517 SIX4Q9UIU6 781 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 R3HCC1Q9Y3T6 440 aaKnown RBP16.63■□□□□ 0.25
COMMD4-212ENST00000565517 PCDHA5Q9Y5H7 936 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 PTPRJQ12913 1337 aa16.63■□□□□ 0.25
COMMD4-212ENST00000565517 DOCK8Q8NF50 2099 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 MAPK13O15264 365 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 XYLBO75191 536 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 KRT19P08727 400 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 DLATP10515 647 aaKnown RBP16.62■□□□□ 0.25
COMMD4-212ENST00000565517 ALADP13716 330 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 TNNI1P19237 187 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 ARPP19P56211 112 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 UBE2HP62256 183 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 CLDN10P78369 228 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 GPR17Q13304 367 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-212ENST00000565517 LMBRD2Q68DH5 695 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-212ENST00000565517 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 ZDHHC14Q8IZN3 488 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 SPATA18Q8TC71 538 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 SMARCE1Q969G3 411 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 CCDC127Q96BQ5 260 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 ACSF2Q96CM8 615 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-212ENST00000565517 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
COMMD4-212ENST00000565517 CPB1P15086 417 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
COMMD4-212ENST00000565517 AP3M2P53677 418 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 DPH6Q7L8W6 267 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 OTOP3Q7RTS5 596 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 THEM5Q8N1Q8 247 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 TMEM86AQ8N2M4 240 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 PARD3BQ8TEW8 1205 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 KHSRPQ92945 711 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD4-212ENST00000565517 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-212ENST00000565517 FRMD4BQ9Y2L6 1034 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 NOTCH4Q99466 2003 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 CLUHO75153 1309 aa16.61■□□□□ 0.25
COMMD4-212ENST00000565517 C2CD4DB7Z1M9 353 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 PRRG1O14668 218 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 DCXO43602 365 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 HUS1O60921 280 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 SEC24AO95486 1093 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 ENPEPQ07075 957 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 ADCY1Q08828 1119 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 BFSP1Q12934 665 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 EDRF1Q3B7T1 1238 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 ZCWPW2Q504Y3 356 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 WSCD1Q658N2 575 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 SCARA3Q6AZY7 606 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 TOP6BLQ8N6T0 577 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 TDRD5Q8NAT2 981 aaKnown RBP16.6■□□□□ 0.25
COMMD4-212ENST00000565517 TMC2Q8TDI7 906 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 HPDLQ96IR7 371 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 FAM84AQ96KN4 292 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 CYP4F11Q9HBI6 524 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
COMMD4-212ENST00000565517 CCL16O15467 120 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 LRG1P02750 347 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 NR2F2P24468 414 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 PRCPP42785 496 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 CASP4P49662 377 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 SMARCB1Q12824 385 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 CENPPQ6IPU0 288 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 LIMS2Q7Z4I7 341 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 EPHX3Q9H6B9 360 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■■□□□ 14.4
COMMD4-212ENST00000565517 INSL5Q9Y5Q6 135 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms