RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LARP1BQ659C4 914 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 OVOS1Q6IE37 1185 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 JADE1Q6IE81 842 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 TSSK4Q6SA08 328 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MFSD6LQ8IWD5 586 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 CD302Q8IX05 232 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 ELMOD1Q8N336 334 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 ATAD1Q8NBU5 361 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 ZSCAN18Q8TBC5 510 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 RAD54LQ92698 747 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 IRF7Q92985 503 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 CALML4Q96GE6 196 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 SENP8Q96LD8 212 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 IKZF4Q9H2S9 585 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 RPF1Q9H9Y2 349 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PARVGQ9HBI0 331 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PRMT8Q9NR22 394 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 ASAH2Q9NR71 780 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 MRPS17Q9Y2R5 130 aaKnown RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 YIPF1Q9Y548 306 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 PCDHGA2Q9Y5H1 932 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-213ENST00000565173 STYXL1Q9Y6J8 313 aa9.32□□□□□ -0.92
CAPN3-213ENST00000565173 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 MTMR11A4FU01 709 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 HEPACAM2A8MVW5 462 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 TISP43B9A030 160 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 K7ENM7 598 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 MAN2B1O00754 1011 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 XPOTO43592 962 aaKnown RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 KINO60870 393 aaKnown RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 SOAT2O75908 522 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 FAM13AO94988 1023 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 CYP11A1P05108 521 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 NFICP08651 508 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 DDIT3P35638 169 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 ACOT2P49753 483 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 MLLT6P55198 1093 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 ZC2HC1CQ53FD0 456 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 WDR44Q5JSH3 913 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 STXBP5Q5T5C0 1151 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 USP49Q70CQ1 688 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 DNAJB7Q7Z6W7 309 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 USP37Q86T82 979 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 TTC9BQ8N6N2 239 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 OR10T2Q8NGX3 314 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 DEPDC1BQ8WUY9 529 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 PSMG2Q969U7 264 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 EPSTI1Q96J88 318 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 MSTO1Q9BUK6 570 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 STRA6Q9BX79 667 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 GPR88Q9GZN0 384 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 CHRDQ9H2X0 955 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 ST6GALNAC4Q9H4F1 302 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 ZSCAN32Q9NX65 697 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 NDRG2Q9UN36 371 aaKnown RBP9.31□□□□□ -0.92
CAPN3-213ENST00000565173 SMC3Q9UQE7 1217 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 DERAQ9Y315 318 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 F5P12259 2224 aa9.31□□□□□ -0.92
CAPN3-213ENST00000565173 ZNF263O14978 683 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 CHADO15335 359 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 PPP1R37O75864 691 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 BMP15O95972 392 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 CHRNB1P11230 501 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ODC1P11926 461 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 TGM1P22735 817 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 PAX3P23760 479 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ADSSP30520 456 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ALDH1A3P47895 512 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 MCM2P49736 904 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 EPHB3P54753 998 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 FCHO2Q0JRZ9 810 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 PLD1Q13393 1074 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 GAS6Q14393 721 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 PTPAQ15257 358 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ZNF720Q7Z2F6 126 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 LRRTM3Q86VH5 581 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ARID3BQ8IVW6 561 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ATRIPQ8WXE1 791 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 FAM3CQ92520 227 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 EPC1Q9H2F5 836 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ZHX3Q9H4I2 956 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ASB7Q9H672 318 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 LMAN1LQ9HAT1 526 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 DLL3Q9NYJ7 618 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 C2CD2Q9Y426 696 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ASB3Q9Y575 518 aa9.3□□□□□ -0.92
CAPN3-213ENST00000565173 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms