RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ECI2O75521 394 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 PRPF6O94906 941 aaKnown RBP10.85□□□□□ -0.67
CMTM3-209ENST00000565003 F13A1P00488 732 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 CYP11A1P05108 521 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 GJA1P17302 382 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 RFX1P22670 979 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 FCARP24071 287 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 EPHA5P54756 1037 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 DUSP4Q13115 394 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 GPR17Q13304 367 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 SNW1Q13573 536 aaKnown RBP10.85□□□□□ -0.67
CMTM3-209ENST00000565003 ALCAMQ13740 583 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 SCARA3Q6AZY7 606 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 CENPPQ6IPU0 288 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 PHLDB3Q6NSJ2 640 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 BRSK2Q8IWQ3 736 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 ELMOD1Q8N336 334 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 DTWD2Q8NBA8 298 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 ATAD1Q8NBU5 361 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 HPS3Q969F9 1004 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 DHX58Q96C10 678 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
CMTM3-209ENST00000565003 FOXQ1Q9C009 403 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 DNAJC25Q9H1X3 360 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 TNMDQ9H2S6 317 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 ASAH2Q9NR71 780 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 GOLGA8IPA6NC78 632 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 GOLGA8JA6NMD2 632 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CYB561D2O14569 222 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 ZNF197O14709 1029 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CUTAO60888 179 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 SOAT2O75908 522 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 MICAL2O94851 1124 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 IL18RAPO95256 599 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 DCNP07585 359 aaKnown RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 MYL4P12829 197 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 GARTP22102 1010 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 TAF6P49848 677 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CDR1P51861 262 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 STARD6P59095 220 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 MLF2Q15773 248 aaPredicted RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 FAM78AQ5JUQ0 283 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CYP4A22Q5TCH4 519 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 TANGO2Q6ICL3 276 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 NT5DC4Q86YG4 428 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 TMC8Q8IU68 726 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 SYCP3Q8IZU3 236 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 PJA1Q8NG27 643 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 SHKBP1Q8TBC3 707 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 BORCS6Q96GS4 357 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 ZNF512Q96ME7 567 aaPredicted RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 ZSWIM3Q96MP5 696 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 CUEDC2Q9H467 287 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 PCIF1Q9H4Z3 704 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 RBAKQ9NYW8 714 aaPredicted RBP10.84□□□□□ -0.67
CMTM3-209ENST00000565003 DLGAP2Q9P1A6 1054 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 NCANO14594 1321 aa10.84□□□□□ -0.67
CMTM3-209ENST00000565003 MYO15AQ9UKN7 3530 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
CMTM3-209ENST00000565003 EXTL3O43909 919 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 LRRN2O75325 713 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ITGB3P05106 788 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 GLULP15104 373 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 PAX3P23760 479 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 POLR2BP30876 1174 aaKnown RBP10.83□□□□□ -0.68
CMTM3-209ENST00000565003 HOXD13P35453 343 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ASIC1P78348 528 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 PLD1Q13393 1074 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 GRM2Q14416 872 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ANGPT1Q15389 498 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 TEAD2Q15562 447 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 SV2CQ496J9 727 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 WSCD1Q658N2 575 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 C1orf127Q8N9H9 656 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 LEMD2Q8NC56 503 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 CXorf38Q8TB03 319 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ASB16Q96NS5 453 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 DDX23Q9BUQ8 820 aaKnown RBP10.83□□□□□ -0.68
CMTM3-209ENST00000565003 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ZFP14Q9HCL3 533 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 PDE11AQ9HCR9 933 aa10.83□□□□□ -0.68
CMTM3-209ENST00000565003 ZNF334Q9HCZ1 680 aaPredicted RBP10.83□□□□□ -0.68
CMTM3-209ENST00000565003 DSEQ9UL01 958 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms