RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	TMEM139	Q8IV31	216 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	HERC6	Q8IVU3	1022 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SP7	Q8TDD2	431 aa	Predicted RBP	10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	CPLX3	Q8WVH0	158 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	ELMO3	Q96BJ8	720 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SDCBP2	Q9H190	292 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	CWH43	Q9H720	699 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SMYD3	Q9H7B4	428 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.54	□□□□□ -0.72	5e-7	■■■■■ 305.5
SIN3A-205	ENST00000564778	MARCH5	Q9NX47	278 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	CACNG4	Q9UBN1	327 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	NXF1	Q9UBU9	619 aa	Known RBP	10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	DNAJB4	Q9UDY4	337 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	POLI	Q9UNA4	740 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SNX9	Q9Y5X1	595 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SLC4A7	Q9Y6M7	1214 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	KIAA1671	Q9BY89	1806 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	SZT2	Q5T011	3432 aa		10.54	□□□□□ -0.72
SIN3A-205	ENST00000564778	ARHGEF37	A1IGU5	675 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	FOXN3	O00409	490 aa	Predicted RBP	10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	CILP	O75339	1184 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	B3GAT3	O94766	335 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	EFEMP2	O95967	443 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	CYP11A1	P05108	521 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	GALT	P07902	379 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	FER	P16591	822 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	ATP2A2	P16615	1042 aa	Known RBP	10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	SLC11A1	P49279	550 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	GOLGA8F	Q08AF8	430 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	GOLGA8DP	Q0D2H9	430 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	ARHGAP44	Q17R89	818 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	SOWAHA	Q2M3V2	549 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	PAN2	Q504Q3	1202 aa	Known RBP	10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	SFMBT2	Q5VUG0	894 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	HGSNAT	Q68CP4	663 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	WDR59	Q6PJI9	974 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	TMEM86A	Q8N2M4	240 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	CCDC112	Q8NEF3	446 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	KBTBD7	Q8WVZ9	684 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	SUSD3	Q96L08	255 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	YME1L1	Q96TA2	773 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	CISH	Q9NSE2	258 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	HCST	Q9UBK5	93 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	L1RE1	Q9UN81	338 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	INSL6	Q9Y581	213 aa		10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778	MRPL42	Q9Y6G3	142 aa	Known RBP	10.53	□□□□□ -0.72
SIN3A-205	ENST00000564778		F8W810	466 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	GABRD	O14764	452 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	NRP1	O14786	923 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	HUS1	O60921	280 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	CLSTN1	O94985	981 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ITGB1	P05556	798 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	PTMA	P06454	111 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	LINC00271	P0C7V0	271 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	CCDC172	P0C7W6	258 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	PNMA6A	P0CW24	399 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ODC1	P11926	461 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	LAG3	P18627	525 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	TYMP	P19971	482 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	WARS	P23381	471 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	IGFBP6	P24592	240 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ANXA13	P27216	316 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	OR1G1	P47890	313 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	BCAR1	P56945	870 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ELAVL2	Q12926	359 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	BTG3	Q14201	252 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ASIC2	Q16515	512 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	TIGD5	Q53EQ6	642 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	HS1BP3	Q53T59	392 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	C9orf50	Q5SZB4	431 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	IRF2BP2	Q7Z5L9	587 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	UNC93A	Q86WB7	457 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	LRRC8A	Q8IWT6	810 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	RNF168	Q8IYW5	571 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ADGRF2	Q8IZF7	708 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	PDCL2	Q8N4E4	241 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	APPL2	Q8NEU8	664 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	WHAMM	Q8TF30	809 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	CLP1	Q92989	425 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	SENP8	Q96LD8	212 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	RNPC3	Q96LT9	517 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	RAD9A	Q99638	391 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	SYT11	Q9BT88	431 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	COLEC11	Q9BWP8	271 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	ADAM28	Q9UKQ2	775 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	DSE	Q9UL01	958 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	PCDHB8	Q9UN66	801 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	BZW2	Q9Y6E2	419 aa	Known RBP	10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	VWA8	A3KMH1	1905 aa		10.52	□□□□□ -0.73
SIN3A-205	ENST00000564778	SSU72P8	A0A1W2PR75	194 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	SOX1	O00570	391 aa	Predicted RBP	10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	CYB561D2	O14569	222 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	SYN3	O14994	580 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	TRAPPC3	O43617	180 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	GFPT2	O94808	682 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	ALDH2	P05091	517 aa		10.51	□□□□□ -0.73
SIN3A-205	ENST00000564778	SERPING1	P05155	500 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms