RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 ZC3H3Q8IXZ2 948 aaKnown RBP17.18■□□□□ 0.34
RAB40C-208ENST00000564703 CCDC150Q8NCX0 1101 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 SLC22A17Q8WUG5 538 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 BORCS6Q96GS4 357 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 GDAP2Q9NXN4 497 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 CDY1Q9Y6F8 540 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 SLC34A2O95436 690 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 CYP11A1P05108 521 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TRIM49P0CI25 452 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TRIM49CP0CI26 452 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 HOXB8P17481 243 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-208ENST00000564703 ELF1P32519 619 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 GCLMP48507 274 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 CLCN4P51793 760 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 MYL6P60660 151 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TNNC1P63316 161 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 RAB33AQ14088 237 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 COL19A1Q14993 1142 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 ZACNQ401N2 412 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
RAB40C-208ENST00000564703 KRT39Q6A163 491 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TMEM86AQ8N2M4 240 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 CXorf38Q8TB03 319 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 IMPG2Q9BZV3 1241 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-208ENST00000564703 PLEKHA4Q9H4M7 779 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 PRDM6Q9NQX0 595 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
RAB40C-208ENST00000564703 H3BQ06 376 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 P4HA1P13674 534 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 EPCAMP16422 314 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 MRPS5P82675 430 aaKnown RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 CETN1Q12798 172 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 STX1AQ16623 288 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 PUS10Q3MIT2 529 aaKnown RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ZNF667Q5HYK9 610 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 WSCD1Q658N2 575 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ANKRD54Q6NXT1 300 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 FAM114A1Q8IWE2 563 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ZNF461Q8TAF7 563 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ATXN2LQ8WWM7 1075 aaKnown RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 TAF4BQ92750 862 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 MAGEC2Q9UBF1 373 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 NXF1Q9UBU9 619 aaKnown RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
RAB40C-208ENST00000564703 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
RAB40C-208ENST00000564703 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 TGM5O43548 720 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
RAB40C-208ENST00000564703 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 CPB1P15086 417 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 LTBRP36941 435 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 LHX1P48742 406 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 MCCD1P59942 119 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-208ENST00000564703 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
RAB40C-208ENST00000564703 MYL7Q01449 175 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 PPP3CAQ08209 521 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 KCNC3Q14003 757 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 SLC8B1Q6J4K2 584 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 CES5AQ6NT32 575 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 LILRA6Q6PI73 481 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 KREMEN2Q8NCW0 462 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 NAT10Q9H0A0 1025 aaKnown RBP17.15■□□□□ 0.34
RAB40C-208ENST00000564703 SNX25Q9H3E2 840 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAB40C-208ENST00000564703 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
RAB40C-208ENST00000564703 ADAM12O43184 909 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 TBC1D4O60343 1298 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 GLP2RO95838 553 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 HLA-DRAP01903 254 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 MXI1P50539 228 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 TFF2Q03403 129 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 DLX2Q07687 328 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-208ENST00000564703 CLUL1Q15846 466 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 LIN9Q5TKA1 542 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 TPGS2Q68CL5 300 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 CCDC149Q6ZUS6 474 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 DCP1BQ8IZD4 617 aaKnown RBP17.14■□□□□ 0.33
RAB40C-208ENST00000564703 PDCL2Q8N4E4 241 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 SPATA18Q8TC71 538 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 MAN1C1Q9NR34 630 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 CLEC1BQ9P126 229 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms