RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 RNF181Q9P0P0 153 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 NFU1Q9UMS0 254 aa7.75□□□□□ -1.17
HERPUD1-209ENST00000564678 ADGRA2Q96PE1 1338 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 SIP14410 1827 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 IGKV6-21A0A0C4DH24 114 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ADM5C9JUS6 153 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TBXAS1P24557 533 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CTNNA2P26232 953 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 IRS1P35568 1242 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 DRG2P55039 364 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PTENP60484 403 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 POU5F1Q01860 360 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 DHX34Q14147 1143 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 KCTD2Q14681 263 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CELF3Q5SZQ8 465 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 MORN1Q5T089 497 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PPP4R4Q6NUP7 873 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TRIM72Q6ZMU5 477 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 EFCAB13Q8IY85 973 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 SHCBP1Q8NEM2 672 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 FBF1Q8TES7 1133 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 LRRC45Q96CN5 670 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ANAPC16Q96DE5 110 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 OTUD5Q96G74 571 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 VCPIP1Q96JH7 1222 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 GDAP1L1Q96MZ0 367 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 RUNDC3BQ96NL0 473 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 RUFY1Q96T51 708 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CGRRF1Q99675 332 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PAGR1Q9BTK6 254 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 SPON2Q9BUD6 331 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PLVAPQ9BX97 442 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 AP1M1Q9BXS5 423 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 RAB17Q9H0T7 212 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 C2orf40Q9H1Z8 148 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 AVENQ9NQS1 362 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ENAMQ9NRM1 1142 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM114A2Q9NRY5 505 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TOPORSQ9NS56 1045 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 RBAKQ9NYW8 714 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 RBPJLQ9UBG7 517 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PRDM4Q9UKN5 801 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CNTN6Q9UQ52 1028 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 UTP11Q9Y3A2 253 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 OTOFQ9HC10 1997 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CLDN3O15551 220 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ASAP2O43150 1006 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TOM1L1O75674 476 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 HLA-DRAP01903 254 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 POTEJP0CG39 1038 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 UNGP13051 313 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 HSPA9P38646 679 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PEX5P50542 639 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 NLRP11P59045 1033 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 MRPS25P82663 173 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 SPDYCQ5MJ68 293 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CFAP58Q5T655 872 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 IER5LQ5T953 404 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TAF3Q5VWG9 929 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CDCA2Q69YH5 1023 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ARMC9Q7Z3E5 817 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ZNF564Q8TBZ8 553 aaPredicted RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ATP8B4Q8TF62 1192 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CD101Q93033 1021 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 GPR20Q99678 358 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 ZSWIM1Q9BR11 485 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 MSTO1Q9BUK6 570 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 TARS2Q9BW92 718 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 MRPL4Q9BYD3 311 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 DDX47Q9H0S4 455 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM204AQ9H8W3 233 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 PCDHA3Q9Y5H8 950 aa7.74□□□□□ -1.17
HERPUD1-209ENST00000564678 CNTNAP2Q9UHC6 1331 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CFAP69A5D8W1 941 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ASB14A6NK59 587 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 NOP56O00567 594 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MSCO60682 206 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PHACTR2O75167 634 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 RPS6KA5O75582 802 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 KRT5P13647 590 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CHRNA3P32297 505 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 GBP1P32455 592 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CTNNA1P35221 906 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 NOS2P35228 1153 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PIK3CAP42336 1068 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 SLC1A1P43005 524 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ACOT2P49753 483 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CAPSQ13938 189 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MESDQ14696 234 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 TAF1CQ15572 869 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 LY6KQ17RY6 165 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 SEL1L2Q5TEA6 688 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 DCAF12L1Q5VU92 463 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 TDRD10Q5VZ19 366 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ALKBH2Q6NS38 261 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms