RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 SLC8B1Q6J4K2 584 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 CYP26C1Q6V0L0 522 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 CCDC149Q6ZUS6 474 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 METTL23Q86XA0 190 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 WDR49Q8IV35 697 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
CDH1-206ENST00000564676 C1orf127Q8N9H9 656 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 ZNF461Q8TAF7 563 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 FEZF2Q8TBJ5 459 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
CDH1-206ENST00000564676 FAM84AQ96KN4 292 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 GSDMAQ96QA5 445 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
CDH1-206ENST00000564676 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 POMKQ9H5K3 350 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 ZDHHC7Q9NXF8 308 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 ITGA11Q9UKX5 1188 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 DSEQ9UL01 958 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 NR2E1Q9Y466 385 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 PCDHA5Q9Y5H7 936 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 WDR27A2RRH5 827 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 XIRP2A4UGR9 3374 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 OR6C75A6NL08 312 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 PRRG1O14668 218 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 HNRNPA1P09651 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDH1-206ENST00000564676 CPB1P15086 417 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 RPL13P26373 211 aaKnown RBP10.71□□□□□ -0.69
CDH1-206ENST00000564676 UBE2HP62256 183 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 MYBPC2Q14324 1141 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 GSE1Q14687 1217 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 UVSSAQ2YD98 709 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 WSCD1Q658N2 575 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.69
CDH1-206ENST00000564676 SMYD4Q8IYR2 804 aaPredicted RBP10.71□□□□□ -0.69
CDH1-206ENST00000564676 THEM5Q8N1Q8 247 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 LRRC52Q8N7C0 313 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 OR5B17Q8NGF7 314 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 SLC7A14Q8TBB6 771 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 MFSD14AQ96MC6 490 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 CGRRF1Q99675 332 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 CYP4F11Q9HBI6 524 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 DMAC2Q9NW81 257 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 SIX4Q9UIU6 781 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 POLIQ9UNA4 740 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 FRMD4BQ9Y2L6 1034 aa10.71□□□□□ -0.69
CDH1-206ENST00000564676 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 PTPRJQ12913 1337 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 LOC730098B7Z3J9 87 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 CCL16O15467 120 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 PHACTR2O75167 634 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 XYLBO75191 536 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 ABLIM3O94929 683 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 CYP11A1P05108 521 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 OR4Q2P0C623 313 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 NR2F2P24468 414 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 CASP4P49662 377 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 ADCY1Q08828 1119 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 MYO1EQ12965 1108 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 TRPC3Q13507 836 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 ZNF658Q5TYW1 1059 aaPredicted RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 SCARA3Q6AZY7 606 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 RTL10Q7L3V2 364 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 TRAPPC11Q7Z392 1133 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 ZNF707Q96C28 371 aaPredicted RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 BORCS6Q96GS4 357 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 HPDLQ96IR7 371 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 IPO9Q96P70 1041 aaKnown RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 RHOBTB2Q9BYZ6 727 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 GTPBP4Q9BZE4 634 aaKnown RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 WDR6Q9NNW5 1121 aaKnown RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
CDH1-206ENST00000564676 TRAF3IP3Q9Y228 551 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 SNX9Q9Y5X1 595 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
CDH1-206ENST00000564676 C2orf16Q68DN1 1984 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 HUS1O60921 280 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 CLSTN1O94985 981 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 SEC24AO95486 1093 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 LRG1P02750 347 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 ATF2P15336 505 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 HOXA9P31269 272 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 PRCPP42785 496 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 ADAM9Q13443 819 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 BIRC3Q13489 604 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 STIM1Q13586 685 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 NFIL3Q16649 462 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 ISM2Q6H9L7 571 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 RNF19BQ6ZMZ0 732 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 OTOP3Q7RTS5 596 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 CXorf38Q8TB03 319 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 SPATA20Q8TB22 786 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 PARD3BQ8TEW8 1205 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms