RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 PCDHGA2Q9Y5H1 932 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 COL4A3Q01955 1670 aa20.54■□□□□ 0.88
NME3-207ENST00000564628 SMIM28A0A1B0GU29 152 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 PVALEFA0A1B0GWK0 134 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 TISP43B9A030 160 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 OGTO15294 1046 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 CLTAP09496 248 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 IGFBP6P24592 240 aaPredicted RBP20.53■□□□□ 0.88
NME3-207ENST00000564628 TKTP29401 623 aaKnown RBP20.53■□□□□ 0.88
NME3-207ENST00000564628 AFMP43652 599 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 KYAT1Q16773 422 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 SLC10A6Q3KNW5 377 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 ZBTB41Q5SVQ8 909 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 EPM2AIP1Q7L775 607 aaPredicted RBP20.53■□□□□ 0.88
NME3-207ENST00000564628 GLIS3Q8NEA6 775 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 HPS3Q969F9 1004 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 CLDN23Q96B33 292 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 ZMAT2Q96NC0 199 aaKnown RBP20.53■□□□□ 0.88
NME3-207ENST00000564628 ACCSQ96QU6 501 aa20.53■□□□□ 0.88
NME3-207ENST00000564628 ARHGEF37A1IGU5 675 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 NCAM2O15394 837 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 KLRC4O43908 158 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 MYL1P05976 194 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 ADRB2P07550 413 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 RHOP08100 348 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 ADSSP30520 456 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 RPS9P46781 194 aaKnown RBP20.52■□□□□ 0.88
NME3-207ENST00000564628 SEZ6Q53EL9 994 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 FAM26FQ5R3K3 315 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 SLFN12LQ6IEE8 588 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 DCLK2Q8N568 766 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 ZBTB44Q8NCP5 570 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 C3orf58Q8NDZ4 430 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 ING5Q8WYH8 240 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 MSTO1Q9BUK6 570 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 EXOC7Q9UPT5 735 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 DNAH14Q0VDD8 3507 aa20.52■□□□□ 0.88
NME3-207ENST00000564628 TTC26A0AVF1 554 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
NME3-207ENST00000564628 EIF3DO15371 548 aaKnown RBP eCLIP20.51■□□□□ 0.87
NME3-207ENST00000564628 ABLIM3O94929 683 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 CXCL8P10145 99 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 PTPN2P17706 415 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 TNFSF9P41273 254 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 MATR3P43243 847 aaKnown RBP eCLIP20.51■□□□□ 0.87
NME3-207ENST00000564628 ROR1Q01973 937 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 SLC5A9Q2M3M2 681 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 KRBA2Q6ZNG9 492 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 ATRIPQ8WXE1 791 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 NELL1Q92832 810 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 ELSPBP1Q96BH3 223 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 GBP4Q96PP9 640 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 PLEKHA5Q9HAU0 1116 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 GOLGA2P5Q9HBQ8 144 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 SLC38A7Q9NVC3 462 aa20.51■□□□□ 0.87
NME3-207ENST00000564628 CPSF3Q9UKF6 684 aaKnown RBP20.51■□□□□ 0.87
NME3-207ENST00000564628 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
NME3-207ENST00000564628 I3L4J1 428 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 MICAL2O94851 1124 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 PRPF6O94906 941 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 LRG1P02750 347 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 CD72P21854 359 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 TARSP26639 723 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 HOXD13P35453 343 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 BRCC3P46736 316 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 CSTF1Q05048 431 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 SOX4Q06945 474 aaPredicted RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 VARS2Q5ST30 1063 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 ZNF852Q6ZMS4 543 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 STXBP4Q6ZWJ1 553 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
NME3-207ENST00000564628 DNASE1L2Q92874 299 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 ZSCAN32Q9NX65 697 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 UBE4BO95155 1302 aa20.5■□□□□ 0.87
NME3-207ENST00000564628 CEP250Q9BV73 2442 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 SYN3O14994 580 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 TBC1D4O60343 1298 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 ZNF202O95125 648 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 ATF2P15336 505 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 ELF1P32519 619 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 POU5F1Q01860 360 aaKnown RBP20.49■□□□□ 0.87
NME3-207ENST00000564628 POSTNQ15063 836 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 BMT2Q1RMZ1 405 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 PRSS36Q5K4E3 855 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 TCEAL8Q8IYN2 117 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
NME3-207ENST00000564628 ENGASEQ8NFI3 743 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 ZNF507Q8TCN5 953 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 PLA2G2FQ9BZM2 168 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 NCDNQ9UBB6 729 aa20.49■□□□□ 0.87
NME3-207ENST00000564628 AGO2Q9UKV8 859 aaKnown RBP20.49■□□□□ 0.87
NME3-207ENST00000564628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
NME3-207ENST00000564628 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
NME3-207ENST00000564628 PRRG1O14668 218 aa20.48■□□□□ 0.87
NME3-207ENST00000564628 LILRB5O75023 590 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms