RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CLIC2O15247 247 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 SPTLC1O15269 473 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 TNNC2P02585 160 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 FSHRP23945 695 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 POLR2BP30876 1174 aaKnown RBP21.42■■□□□ 1.02
CMTM3-207ENST00000564060 CYP2J2P51589 502 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 WNT7BP56706 349 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 ZXDAP98168 799 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 STK4Q13043 487 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 GET4Q7L5D6 327 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-207ENST00000564060 GRASPQ7Z6J2 395 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-207ENST00000564060 UBALD2Q8IYN6 164 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 THEM5Q8N1Q8 247 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 C1orf127Q8N9H9 656 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 FEZF2Q8TBJ5 459 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 FNBP1Q96RU3 617 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 MTMR12Q9C0I1 747 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 INTS13Q9NVM9 706 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 AGAP1Q9UPQ3 857 aa21.42■■□□□ 1.02
CMTM3-207ENST00000564060 RHOBTB3O94955 611 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 KRT19P08727 400 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 RBP5P82980 135 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 ADCY1Q08828 1119 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 DPYDQ12882 1025 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 GPR17Q13304 367 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 KCNB1Q14721 858 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 DUOXA2Q1HG44 320 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 ELMOD1Q8N336 334 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 CSGALNACT2Q8N6G5 542 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 LRFN3Q9BTN0 628 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 IGSF9Q9P2J2 1179 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 EPS15L1Q9UBC2 864 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 LIMD1Q9UGP4 676 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 INSL5Q9Y5Q6 135 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 NOTCH4Q99466 2003 aa21.41■■□□□ 1.02
CMTM3-207ENST00000564060 EXOC3O60645 756 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 SIGLEC14Q08ET2 396 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 MYO1EQ12965 1108 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 PLD1Q13393 1074 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 RDH13Q8NBN7 331 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 NXPE3Q969Y0 559 aa21.4■■□□□ 1.02
CMTM3-207ENST00000564060 HOOK1Q9UJC3 728 aaKnown RBP21.4■■□□□ 1.02
CMTM3-207ENST00000564060 TECTAO75443 2155 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 FAM86C2PA6NEL3 165 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 PDXKO00764 312 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 PRR29P0C7W0 189 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 TNNI1P19237 187 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 CYP24A1Q07973 514 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 PSMD6Q15008 389 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 PABPC1LQ4VXU2 614 aaKnown RBP21.39■■□□□ 1.01
CMTM3-207ENST00000564060 TRIM67Q6ZTA4 783 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 SLC9A9Q8IVB4 645 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 SPATA18Q8TC71 538 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 TMEM174Q8WUU8 243 aa21.39■■□□□ 1.01
CMTM3-207ENST00000564060 CALUO43852 315 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-207ENST00000564060 HUS1O60921 280 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 DLATP10515 647 aaKnown RBP21.38■■□□□ 1.01
CMTM3-207ENST00000564060 PTPN2P17706 415 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 FAM160A1Q05DH4 1040 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 SMARCB1Q12824 385 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 BFSP1Q12934 665 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 IQCEQ6IPM2 695 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 RNF19BQ6ZMZ0 732 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 FMR1NBQ8N0W7 255 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-207ENST00000564060 TMEM86AQ8N2M4 240 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 BORCS6Q96GS4 357 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 MYADMQ96S97 322 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 CGRRF1Q99675 332 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 AVENQ9NQS1 362 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-207ENST00000564060 RMND1Q9NWS8 449 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 GDAP2Q9NXN4 497 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 HSFX1Q9UBD0 423 aa21.38■■□□□ 1.01
CMTM3-207ENST00000564060 N4BP1O75113 896 aaKnown RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 SEC24AO95486 1093 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 ASGR2P07307 311 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 LAMP2P13473 410 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 ANP32AP39687 249 aaKnown RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 WSCD1Q658N2 575 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 LMBRD2Q68DH5 695 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 LEMD2Q8NC56 503 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 C2orf15Q8WU43 125 aaKnown RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 ZNF512Q96ME7 567 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 KCTD10Q9H3F6 313 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 DNMT3BQ9UBC3 853 aaKnown RBP21.37■■□□□ 1.01
CMTM3-207ENST00000564060 CDH7Q9ULB5 785 aa21.37■■□□□ 1.01
CMTM3-207ENST00000564060 OR4Q2P0C623 313 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 AP3M2P53677 418 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 TSPY1Q01534 308 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 TWF1Q12792 350 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 TDGQ13569 410 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 BMP8AQ7Z5Y6 402 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 DCP1BQ8IZD4 617 aaKnown RBP21.36■■□□□ 1.01
CMTM3-207ENST00000564060 GUF1Q8N442 669 aaKnown RBP21.36■■□□□ 1.01
CMTM3-207ENST00000564060 TOP6BLQ8N6T0 577 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 OR5B17Q8NGF7 314 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 CXorf38Q8TB03 319 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 CCDC127Q96BQ5 260 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 MFSD14AQ96MC6 490 aa21.36■■□□□ 1.01
CMTM3-207ENST00000564060 TIGD1Q96MW7 591 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms