RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CHRM2P08172 466 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 PPP3CBP16298 524 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 MALP21145 153 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 PIGFQ07326 219 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 CCDC93Q567U6 631 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 ZKSCAN2Q63HK3 967 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 KAZNQ674X7 775 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 SLC4A10Q6U841 1118 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 TMPRSS9Q7Z410 1059 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 TTC7BQ86TV6 843 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 AOPEPQ8N6M6 819 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 SNX19Q92543 992 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 WASHC2CQ9Y4E1 1318 aa4.4□□□□□ -1.71
HMGB1P33-201ENST00000563485 ZNF785A8K8V0 405 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ALG1L2C9J202 215 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ADM5C9JUS6 153 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 RPLP2P05387 115 aaKnown RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ELFN1P0C7U0 828 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 LMO1P25800 156 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 HNRNPMP52272 730 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 PSMC1P62191 440 aaKnown RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 POU6F2P78424 691 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 NHLH1Q02575 133 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 AKNAD1Q5T1N1 836 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 SLC30A10Q6XR72 485 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 MICALCLQ6ZW33 695 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 UROC1Q96N76 676 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 TRIB1Q96RU8 372 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 SMOQ99835 787 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 MAN1C1Q9NR34 630 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ARPP21Q9UBL0 812 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 FRMD4BQ9Y2L6 1034 aa4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P33-201ENST00000563485 E7ENX8 843 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 ANXA1P04083 346 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 LPOP22079 712 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 GRIA3P42263 894 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 NPTX2P47972 431 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 PROK1P58294 105 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 TAP2Q03519 686 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 HLXQ14774 488 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 PTPRRQ15256 657 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 TXNRD1Q16881 649 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 NBPF8Q3BBV2 869 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 MIER2Q8N344 545 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 B3GALNT2Q8NCR0 500 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 POC1BQ8TC44 478 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 SCAMP4Q969E2 229 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 PGBD1Q96JS3 809 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 CPNE5Q9HCH3 593 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 SLAMF7Q9NQ25 335 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 SIDT1Q9NXL6 827 aaKnown RBP4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 ETAA1Q9NY74 926 aa4.38□□□□□ -1.71
HMGB1P33-201ENST00000563485 CCDC151A5D8V7 595 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 PRSS29PA6NIE9 313 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 LINC00473A8K010 186 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 ORC4O43929 436 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 GJB1P08034 283 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 GNAI3P08754 354 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 CCND1P24385 295 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 SMARCA1P28370 1054 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 PHKA1P46020 1223 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 FXR1P51114 621 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 ZNF135P52742 658 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 GNAI1P63096 354 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 TSTD2Q5T7W7 516 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 GRASPQ7Z6J2 395 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 PDSS2Q86YH6 399 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 FAM9AQ8IZU1 332 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 C3orf20Q8ND61 904 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 SMOC2Q9H3U7 446 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 AGAP1Q9UPQ3 857 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 PCDHA3Q9Y5H8 950 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 ENTPD2Q9Y5L3 495 aa4.37□□□□□ -1.71
HMGB1P33-201ENST00000563485 A0A0B4J269 797 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 WDR27A2RRH5 827 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 PROP1O75360 226 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 RHOP08100 348 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 CHRM3P20309 590 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 PRDX5P30044 214 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 CYP2C19P33261 490 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 PIK3CGP48736 1102 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 NDUFV1P49821 464 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 TUBB3Q13509 450 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 FAM90A1Q86YD7 464 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 SARAFQ96BY9 339 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 TIMP4Q99727 224 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 GPR35Q9HC97 309 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 PCDH12Q9NPG4 1184 aa4.36□□□□□ -1.71
HMGB1P33-201ENST00000563485 GNL3LQ9NVN8 582 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms