RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC196A0A1B0GTZ2 297 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 SYN3O14994 580 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 N4BP3O15049 544 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 TRAPPC3O43617 180 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 ATG13O75143 517 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 DGAT1O75907 488 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 LYPLA2O95372 231 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 EGFP01133 1207 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 BCKDHBP21953 392 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 WEE1P30291 646 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 CYP4A11Q02928 519 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 UAP1L1Q3KQV9 507 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 ITPRIPL2Q3MIP1 535 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 GAREM2Q75VX8 874 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 SYT13Q7L8C5 426 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 DAGLBQ8NCG7 672 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 FAM200AQ8TCP9 573 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 FAM83CQ9BQN1 747 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 CCDC113Q9H0I3 377 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 POLR3FQ9H1D9 316 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 SLITRK6Q9H5Y7 841 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 GPRC5CQ9NQ84 441 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 EVLQ9UI08 416 aaPredicted RBP8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 MAFFQ9ULX9 164 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 GON4LQ3T8J9 2241 aa8.5□□□□□ -1.05
HERPUD1-206ENST00000563343 TCHHQ07283 1943 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 SMIM28A0A1B0GU29 152 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 LRRIQ4A6NIV6 560 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 H7C4K7 107 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 IFNAR1P17181 557 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 RARRES1P49788 294 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 NLRP5P59047 1200 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 SIM1P81133 766 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 INF2Q27J81 1249 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 CTXN3Q4LDR2 81 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 NAIF1Q69YI7 327 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 PPP4R3AQ6IN85 833 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 ALKAL1Q6UXT8 129 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 BLIDQ8IZY5 108 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 GLIS3Q8NEA6 775 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 RIN3Q8TB24 985 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 BPIFB1Q8TDL5 484 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 ZMAT2Q96NC0 199 aaKnown RBP8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 POLR3CQ9BUI4 534 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 ANKEF1Q9NU02 776 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 INVSQ9Y283 1065 aa8.49□□□□□ -1.05
HERPUD1-206ENST00000563343 H0Y626 953 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 ACKR2O00590 384 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 PODXLO00592 558 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 C1QL1O75973 258 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 TRIM16O95361 564 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 APBB3O95704 486 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 ENGP17813 658 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 MCM2P49736 904 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 GRSF1Q12849 480 aaKnown RBP eCLIP8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 RUNX3Q13761 415 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 DMC1Q14565 340 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 GPR158Q5T848 1215 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 NCAPH2Q6IBW4 605 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 CYP2U1Q7Z449 544 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 HAUS6Q7Z4H7 955 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 RASSF3Q86WH2 238 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 CEP120Q8N960 986 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 RPLP0P6Q8NHW5 317 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 BSNDQ8WZ55 320 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 DDX12PQ92771 950 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 SUSD3Q96L08 255 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 HSD17B14Q9BPX1 270 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 EIF2AK1Q9BQI3 630 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 SLC26A6Q9BXS9 759 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 AGXT2Q9BYV1 514 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 SLKQ9H2G2 1235 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 SLC32A1Q9H598 525 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 TMEM74BQ9NUR3 256 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 TPCN1Q9ULQ1 816 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 TBX20Q9UMR3 447 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 MYH11P35749 1972 aa8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 MUC22E2RYF6 1773 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-206ENST00000563343 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 MYO18AQ92614 2054 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 A0A087WWV3 80 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 ANTXRLA6NF34 631 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 USO1O60763 962 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 PRB1P04280 392 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 CPA1P15085 419 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 DRD1P21728 446 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 GBP1P32455 592 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 GALK1P51570 392 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 DGKEP52429 567 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 LMAN2Q12907 356 aa8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
HERPUD1-206ENST00000563343 DCAF4L1Q3SXM0 396 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms