RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 E9PAM4 449 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 RRP8O43159 456 aaKnown RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 ENGP17813 658 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 RARSP54136 660 aaKnown RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 TLE3Q04726 772 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 CDK5R2Q13319 367 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 ZNF746Q6NUN9 644 aaPredicted RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 SLC24A5Q71RS6 500 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 GALNT12Q8IXK2 581 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 CHURC1Q8WUH1 139 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 DNAJB3Q8WWF6 145 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 FGF13Q92913 245 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 MKL1Q969V6 931 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 PI4K2AQ9BTU6 479 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 VN1R3Q9BXE9 311 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 CRNKL1Q9BZJ0 848 aaKnown RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 NT5C3AQ9H0P0 336 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 GSX1Q9H4S2 264 aaPredicted RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 ELAC1Q9H777 363 aaKnown RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 PIDD1Q9HB75 910 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 SYNPO2Q9UMS6 1093 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 APOBEC2Q9Y235 224 aaKnown RBP6.83□□□□□ -1.32
TCF4-213ENST00000562543 MRVI1Q9Y6F6 885 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 NOTCH4Q99466 2003 aa6.83□□□□□ -1.32
TCF4-213ENST00000562543 IGKV6D-41A0A0C4DH26 115 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 VAMP4O75379 141 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 ECI2O75521 394 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 CD8BP10966 210 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 CD59P13987 128 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 BCAR1P56945 870 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 FAM189BP81408 668 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 KARSQ15046 597 aaKnown RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 TRIM61Q5EBN2 209 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 CELF3Q5SZQ8 465 aaKnown RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 C12orf60Q5U649 245 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 SLFN13Q68D06 897 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 PMS2CLQ68D20 193 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 ATG14Q6ZNE5 492 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 FAM43BQ6ZT52 329 aaPredicted RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 SLCO6A1Q86UG4 719 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 HDDC3Q8N4P3 179 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 CAMK1GQ96NX5 476 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 PLA2G2FQ9BZM2 168 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 RANBP17Q9H2T7 1088 aaKnown RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 ZDHHC7Q9NXF8 308 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 KIAA1522Q9P206 1035 aaPredicted RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 CLIP2Q9UDT6 1046 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 PLEKHB1Q9UF11 243 aaPredicted RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 DPP7Q9UHL4 492 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 MBD1Q9UIS9 605 aaPredicted RBP6.82□□□□□ -1.32
TCF4-213ENST00000562543 ADAMTS6Q9UKP5 1117 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 TRPV2Q9Y5S1 764 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 PIAS3Q9Y6X2 628 aa6.82□□□□□ -1.32
TCF4-213ENST00000562543 CSMD2Q7Z408 3487 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 CCDC171Q6TFL3 1326 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 CYP2D7A0A087X1C5 515 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 MBLAC1A4D2B0 266 aaPredicted RBP6.81□□□□□ -1.32
TCF4-213ENST00000562543 DCLK1O15075 740 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 EXTL3O43909 919 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 SORBS3O60504 671 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 IDH1O75874 414 aaKnown RBP6.81□□□□□ -1.32
TCF4-213ENST00000562543 B3GALT4O96024 378 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 GLUD1P00367 558 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 LIG1P18858 919 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 IKQ13123 557 aaPredicted RBP6.81□□□□□ -1.32
TCF4-213ENST00000562543 TMEM266Q2M3C6 531 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 TMED8Q6PL24 325 aaPredicted RBP6.81□□□□□ -1.32
TCF4-213ENST00000562543 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 HDAC7Q8WUI4 952 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 IGSF21Q96ID5 467 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 ADAM2Q99965 735 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 NUSAP1Q9BXS6 441 aaKnown RBP6.81□□□□□ -1.32
TCF4-213ENST00000562543 VWA8A3KMH1 1905 aa6.81□□□□□ -1.32
TCF4-213ENST00000562543 KDM3AQ9Y4C1 1321 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 MED13LQ71F56 2210 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 NBASA2RRP1 2371 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 ANKHD1Q8IWZ3 2542 aaKnown RBP6.8□□□□□ -1.32
TCF4-213ENST00000562543 DENND3A2RUS2 1198 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 OPHN1O60890 802 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 GGPS1O95749 300 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 FAM87AP0C7U9 286 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 MYBP10242 640 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 NFATC3Q12968 1075 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 STXBP2Q15833 593 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 DGKKQ5KSL6 1271 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 DOCK5Q9H7D0 1870 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 TRPV5Q9NQA5 729 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 TUBE1Q9UJT0 475 aa6.8□□□□□ -1.32
TCF4-213ENST00000562543 FANCIQ9NVI1 1328 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 SH3BP5O60239 455 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 LEFTY1O75610 366 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 RPLP2P05387 115 aaKnown RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 HLA-EP13747 358 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 UBA1P22314 1058 aaKnown RBP6.79□□□□□ -1.32
TCF4-213ENST00000562543 CCNE1P24864 410 aa6.79□□□□□ -1.32
TCF4-213ENST00000562543 NTHL1P78549 312 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms