RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 LRRC27Q9C0I9 530 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 CUEDC2Q9H467 287 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 ASB7Q9H672 318 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 TMEM206Q9H813 350 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 FAM86C1Q9NVL1 165 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 HSPBP1Q9NZL4 362 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 CEP72Q9P209 647 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 CDH7Q9ULB5 785 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 TCHHQ07283 1943 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 PTPRJQ12913 1337 aa10.24□□□□□ -0.77
NSMCE1-203ENST00000562039 COL4A3Q01955 1670 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 IL18RAPO95256 599 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 PTPN2P17706 415 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 GARTP22102 1010 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 ACAT1P24752 427 aaKnown RBP10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 AVPR2P30518 371 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 NDUFA8P51970 172 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 KRT85P78386 507 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 HTR4Q13639 388 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 ALCAMQ13740 583 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 UVSSAQ2YD98 709 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 SLC39A12Q504Y0 691 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 CYP26C1Q6V0L0 522 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 NPAS3Q8IXF0 933 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 UBALD2Q8IYN6 164 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 TMEM105Q8N8V8 129 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 PRSS33Q8NF86 280 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 OR5B17Q8NGF7 314 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 GIPC2Q8TF65 315 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 SCFD1Q8WVM8 642 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 ELMO3Q96BJ8 720 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 CCDC127Q96BQ5 260 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 PAGE5Q96GU1 130 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 SEPT5Q99719 369 aaPredicted RBP10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 PLA2G2FQ9BZM2 168 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 GOLPH3LQ9H4A5 285 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 EPS15L1Q9UBC2 864 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 AFF4Q9UHB7 1163 aaKnown RBP10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 DUSP12Q9UNI6 340 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 DERAQ9Y315 318 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 C2CD2Q9Y426 696 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 YIPF1Q9Y548 306 aa10.23□□□□□ -0.77
NSMCE1-203ENST00000562039 ARHGEF37A1IGU5 675 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 MTMR11A4FU01 709 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 KRBA1A5PL33 1030 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 TGFB1I1O43294 461 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 PI15O43692 258 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 KLRC4O43908 158 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 CLSTN1O94985 981 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 OAZ2O95190 189 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 LDHAP00338 332 aaKnown RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 C1RP00736 705 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 RFX1P22670 979 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 HOXA9P31269 272 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 GPR15P49685 360 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 GPC5P78333 572 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 GRM2Q14416 872 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 SDHAF4Q5VUM1 108 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 TPGS2Q68CL5 300 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 STXBP4Q6ZWJ1 553 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 PDZD4Q76G19 769 aaPredicted RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 EPM2AIP1Q7L775 607 aaPredicted RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 BMP8AQ7Z5Y6 402 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 LRRTM3Q86VH5 581 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 OSTM1Q86WC4 334 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 METTL23Q86XA0 190 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ZNF507Q8TCN5 953 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 BORCS6Q96GS4 357 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ZNF512Q96ME7 567 aaPredicted RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ZSWIM3Q96MP5 696 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 LPIN3Q9BQK8 851 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 RTP3Q9BQQ7 232 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 RHOBTB2Q9BYZ6 727 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 AGPAT3Q9NRZ7 376 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 TMLHEQ9NVH6 421 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ABI2Q9NYB9 513 aaPredicted RBP10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.22□□□□□ -0.772e-6■■■■□ 25.1
NSMCE1-203ENST00000562039 IGSF9Q9P2J2 1179 aa10.22□□□□□ -0.77
NSMCE1-203ENST00000562039 ZNF233A6NK53 670 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 OR6C75A6NL08 312 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 KPNA7A9QM74 516 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 H0Y858 1186 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 MOSPD3O75425 235 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 SLFN14P0C7P3 912 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 NPR3P17342 541 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 TYMPP19971 482 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 CMA1P23946 247 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 PLA2G5P39877 138 aa10.21□□□□□ -0.77
NSMCE1-203ENST00000562039 SYKP43405 635 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms